Pairwise Alignments

Query, 412 a.a., uracil permease (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 417 a.a., uracil permease from Vibrio cholerae E7946 ATCC 55056

 Score =  585 bits (1507), Expect = e-171
 Identities = 290/393 (73%), Positives = 334/393 (84%)

Query: 8   LQGAQMLFVAFGALVLMPLLTGLDTSVALFTAGIGTLLFQLITKRQVPIFLASSFAFIAP 67
           +QGAQMLFVAFGALVL+PLLTGLD +VALF AG+GTLLFQLIT+R VPIFLASSFAFIAP
Sbjct: 5   IQGAQMLFVAFGALVLVPLLTGLDPNVALFGAGLGTLLFQLITRRSVPIFLASSFAFIAP 64

Query: 68  ILYGVQTWGIPSTMGGIMAAGVVYVCLGALVKVRGTDFIHKLLPPVVVGPVIIIIGLGLA 127
           I++G+QTWGIP+TMGG+MAAG VY+ LG ++KVRG   IHKLLPPVVVGPVI++IGLGLA
Sbjct: 65  IMFGIQTWGIPATMGGLMAAGAVYIVLGGIIKVRGVAIIHKLLPPVVVGPVIMVIGLGLA 124

Query: 128 PVAVNMALGKSGDGSLALVPTNTALIISLVSLCTTIAVAIFAKGLLKVMPILAGIIVGYG 187
           P AVNMALGK+GDGS+ LV    AL IS +SL  T+  ++FAKG  K++PILAGI+ GY 
Sbjct: 125 PAAVNMALGKTGDGSVQLVDPQAALWISCISLLVTVVFSVFAKGFFKLVPILAGIVSGYA 184

Query: 188 LSLAFGIVDFSVVTAANWIAIPKFVAPEFNWHAIAFMIPVAIAPAVEHIGDILAISNVTG 247
           +SL  G+V F+ V  A W+A+P F  PEFN +AI FMIPVAIAPAVEH+GD+LAISNVT 
Sbjct: 185 VSLVMGVVSFAAVEQAAWLALPNFTFPEFNINAILFMIPVAIAPAVEHVGDMLAISNVTN 244

Query: 248 KDFMKKPGLHRTLTGDGVATIAAAAFGGPPNTTYSEVTGAVTLTRNFDPRIMTWTAITAI 307
           KD++KKPGLHRT+ GDGVAT+AA   G PPNTTYSEVTGAV LTR F+P IMTW AITAI
Sbjct: 245 KDYLKKPGLHRTIAGDGVATMAATMLGAPPNTTYSEVTGAVMLTRAFNPAIMTWAAITAI 304

Query: 308 TLAFVGKLGALMQTIPVPVMGGIMCLLFGSIAAVGLNTLIRNHVDLSEPRNLSIVGVTLV 367
            LA VGKLGAL+QTIPVPVMGGIM LLFGSIA VGLNTLI+N VDL + RNL IV VTLV
Sbjct: 305 VLALVGKLGALLQTIPVPVMGGIMILLFGSIATVGLNTLIKNQVDLHKSRNLVIVAVTLV 364

Query: 368 FGIGGMAFGIGSFSLTGISLCGIVAITMNLLLP 400
           FGIGGMAFG+G FSL G+SLCGIVAI +NL+LP
Sbjct: 365 FGIGGMAFGVGDFSLQGVSLCGIVAIVLNLVLP 397