Pairwise Alignments

Query, 236 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 234 a.a., DnaA regulatory inactivator Hda from Pseudomonas stutzeri RCH2

 Score =  208 bits (530), Expect = 6e-59
 Identities = 109/231 (47%), Positives = 152/231 (65%), Gaps = 3/231 (1%)

Query: 6   PLQLSLPVYLPDDETFNSYYPAAGNDEL--IQKLRANAEGHGEAAIYVWGPVKSGRTHLM 63
           P+QL L V L DD TF ++YP A    L  +++L + A G  +  IY+WG    GR+HL+
Sbjct: 3   PIQLPLGVRLRDDATFANFYPGANAAALGYVERLCSPAAGWSDELIYLWGQAGVGRSHLL 62

Query: 64  HAACAHANELDRRSFYLPLGIHASISTALLEGLEQLDLICIDDVDDIAGHPVWEEAIFDL 123
            AAC    E   ++ YLPL        ALL+ LEQ +L+C+DD+D +AG  VWEEA+F L
Sbjct: 63  QAACLRVEERGEQAVYLPLAEVVEYGPALLDNLEQCELVCLDDLDAVAGDAVWEEALFHL 122

Query: 124 YNRVAENKRCALVVSGRSAPADAGFLLPDLVSRMQWGLNYQLQPMADDEKLAALQRRAAM 183
           +NR+ +  R  L+++   +P +    LPDL SR+   L +QLQ ++D++KL ALQ RA+ 
Sbjct: 123 FNRLRDAGR-RLLLAANGSPRELPVKLPDLKSRLSLALVFQLQQLSDEDKLRALQLRASR 181

Query: 184 RGLQLPEDVGRFLLNRMARDLRTLFDVLDKLDKASLVHQRKLTIPFAKEML 234
           RGL LP+DVGRF+L R +R +  LF++LD+LD+ASL  QRKLTIPF KE L
Sbjct: 182 RGLNLPDDVGRFILTRGSRSMNALFELLDQLDQASLQAQRKLTIPFLKETL 232