Pairwise Alignments

Query, 236 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 467 a.a., chromosomal replication initiator protein DnaA from Vibrio cholerae E7946 ATCC 55056

 Score = 65.1 bits (157), Expect = 2e-15
 Identities = 52/227 (22%), Positives = 102/227 (44%), Gaps = 14/227 (6%)

Query: 21  FNSYYPAAGNDELIQKLRANAEGHGEA--AIYVWGPVKSGRTHLMHAAC-------AHAN 71
           FN++     N   +   R  ++  G A   ++++G    G+THL+HA          +A 
Sbjct: 138 FNNFVEGKSNQLGLAAARQVSDNPGAAYNPLFLYGGTGLGKTHLLHAVGNAIVDNNPNAK 197

Query: 72  ELDRRSFYLPLGIHASISTALLEGLEQ----LDLICIDDVDDIAGHPVWEEAIFDLYNRV 127
            +   S      +  ++    +E  ++    +D + IDD+   A     +E  F  +N +
Sbjct: 198 VVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNAL 257

Query: 128 AENKRCALVVSGRSAPADAGFLLPDLVSRMQWGLNYQLQPMADDEKLAALQRRAAMRGLQ 187
            E  +  ++ S R  P +   +   L SR  WGL   ++P   + ++A L ++A    + 
Sbjct: 258 LEGNQQIILTSDRY-PKEISGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKAEDHQIH 316

Query: 188 LPEDVGRFLLNRMARDLRTLFDVLDKLDKASLVHQRKLTIPFAKEML 234
           LP++V  F+  R+  ++R L   L+++   +    R +TI F +E L
Sbjct: 317 LPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREAL 363