Pairwise Alignments

Query, 236 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 233 a.a., DnaA regulatory inactivator Hda from Ralstonia sp. UNC404CL21Col

 Score =  115 bits (287), Expect = 1e-30
 Identities = 80/238 (33%), Positives = 125/238 (52%), Gaps = 15/238 (6%)

Query: 5   SPLQLSLPVYLPDDETFNSYYPAAGNDELIQKLRAN----AEGHG-EAAIYVWGPVKSGR 59
           +P QL L +      TF+++  A GN+E + +LRA      +G   +  +Y+WG   SGR
Sbjct: 3   TPEQLPLELGATPAPTFDNFV-ATGNEEAVLRLRALIPQVVDGTATDRLVYLWGEEGSGR 61

Query: 60  THLMHAACAHANELDRRSFYLPLGIHASISTALLEGLEQLDLICIDDVDDIAGHPVWEE- 118
           +HL+ A CA               +      A  E  E    I +  +DD      W + 
Sbjct: 62  SHLLQAICAQTEAGGYE-------VRTLEPDAPPEAFEFDPTITVWTIDDAERLDEWAQI 114

Query: 119 AIFDLYNRVAENKRCALVVSGRSAPADAGFLLPDLVSRMQWGLNYQLQPMADDEKLAALQ 178
           A+F+L N V  +   A+ +SG +AP  A  L  DL +R+ WGL Y L+P++D +K+ AL+
Sbjct: 115 AVFNLVNEVRAHPHAAIAISGAAAPM-AMPLREDLRTRLGWGLVYWLRPLSDADKVEALR 173

Query: 179 RRAAMRGLQLPEDVGRFLLNRMARDLRTLFDVLDKLDKASLVHQRKLTIPFAKEMLHL 236
           + A  RG+QL  DV ++L+    RD+ +L  +LD LD  SL  +R +T+P  ++ML L
Sbjct: 174 QAARERGMQLSADVPQWLVTHSYRDMPSLMALLDALDTYSLARKRAVTLPLVRDMLAL 231