Pairwise Alignments

Query, 236 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 256 a.a., DnaA regulatory inactivator Hda from Burkholderia phytofirmans PsJN

 Score =  114 bits (284), Expect = 2e-30
 Identities = 80/232 (34%), Positives = 124/232 (53%), Gaps = 15/232 (6%)

Query: 8   QLSLPVYLPDDETFNSYYPAAGNDELIQKLRA--NAEGHGEAA---IYVWGPVKSGRTHL 62
           QL+L +  P   TF++++ A  N EL+ +LR   NA   G  A    Y+WG   SGRTHL
Sbjct: 4   QLTLDLGTPPPSTFDNFF-AGANAELVTRLRELENALAAGPVADRTFYLWGESGSGRTHL 62

Query: 63  MHAACAHANELDRRSFYLPLGIHASISTALLEGLEQLDLICIDDVDDIAGHPVWEEAIFD 122
           + A    A+    R      G  +S++    +   ++ L  IDD D ++     + A+F+
Sbjct: 63  LQALVHEASPGHARF----AGPQSSLAAFSFD--PRVALYAIDDCDALSA--AQQIAVFN 114

Query: 123 LYNRVAENKRCALVVSGRSAPADAGFLLPDLVSRMQWGLNYQLQPMADDEKLAALQRRAA 182
           L+N V  +   ALV +G +AP     +  DL +R+ WGL + L P+ D+ K A L+  A 
Sbjct: 115 LFNEVRAHPTSALVAAG-NAPPIGMTVREDLRTRLGWGLVFHLAPLPDEGKAAVLKHAAR 173

Query: 183 MRGLQLPEDVGRFLLNRMARDLRTLFDVLDKLDKASLVHQRKLTIPFAKEML 234
            RG+ L +DV  +LL    RD+ +L  +LD LD+ SL  +R +T+P  + ML
Sbjct: 174 ERGIMLADDVPAYLLTHFRRDMPSLMALLDALDRFSLEQKRAVTLPLLRTML 225