Pairwise Alignments

Query, 620 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 500 a.a., IMP dehydrogenase from Methanococcus maripaludis S2

 Score = 54.3 bits (129), Expect = 1e-11
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 9/130 (6%)

Query: 144 KDLATTSRISTLMSSSPITIDAHATVTQAALLMRNSRVSSL-LVTDNHKLVGILTDKDLR 202
           K +        L+    +T++  ++V  A  +M    VS L +V++N  LVGILT +DL+
Sbjct: 88  KHVKAVKMAENLVIRDVVTVEPSSSVLDAERIMYEYNVSGLPVVSENKTLVGILTTRDLK 147

Query: 203 NRVLASGLDGQIAVHQAMTTSPISISSNALIFEAMLLMSEHNIHHLPIIDEQNTDEVKAI 262
                   D  +AV   MT   + +  +    E +  + E+ I  LPI+D +NT E+  +
Sbjct: 148 FVP-----DKNVAVETVMTKEVLHVHEDTPYEEILNRLYENKIERLPILD-KNTKEL--L 199

Query: 263 GMVTSTDILR 272
           GMVT  DIL+
Sbjct: 200 GMVTLRDILK 209



 Score = 32.3 bits (72), Expect = 5e-05
 Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 14/119 (11%)

Query: 152 ISTLMSSSPITIDAHATVTQAALLMRNSRVSSLLVTDNHKLVGILTDKDLRNRVLASGLD 211
           I+ L  + PI   A  TV++  L +  +R   + V   +     +T ++    V A  + 
Sbjct: 42  IAGLKLNIPIISAAMDTVSEKDLAIALARRGGIAVIHRN-----MTVEEQLKHVKAVKMA 96

Query: 212 GQIAVHQAMTTSPISISSNALIFEAMLLMSEHNIHHLPIIDEQNTDEVKAIGMVTSTDI 270
             + +   +T  P S      + +A  +M E+N+  LP++ E  T     +G++T+ D+
Sbjct: 97  ENLVIRDVVTVEPSSS-----VLDAERIMYEYNVSGLPVVSENKT----LVGILTTRDL 146