Pairwise Alignments

Query, 354 a.a., 3-oxoacyl-(acyl-carrier-protein) synthase III, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 324 a.a., ketoacyl-ACP synthase III from Rhodanobacter denitrificans FW104-10B01

 Score =  260 bits (665), Expect = 3e-74
 Identities = 139/321 (43%), Positives = 204/321 (63%), Gaps = 4/321 (1%)

Query: 3   YATITGWGKCVPPATLTNDDLATFIETSDEWIKSRTGISQRHISHVN--TSELASVAAKR 60
           Y+ I   G  +P   +TN DL   ++TSDEWI++RTGI QRHI+     T +LA  AA++
Sbjct: 5   YSRIIATGSALPERVVTNADLEKIVDTSDEWIRTRTGIRQRHIAAEGETTGDLAFRAAQQ 64

Query: 61  ALAAAGIEGSEIDMIILASASPDTLIPNIASTVQANIGAN-CAAFDINAACSGFLYGLGL 119
           AL  AG++ SE+D+I+L + +PD + P+ A  VQ  +GAN CAAFD+NAACSGF+Y LG+
Sbjct: 65  ALETAGVKASELDLIVLGTTTPDIIFPSTACLVQHRLGANGCAAFDVNAACSGFVYALGV 124

Query: 120 ASSQIKSGQCKKVLVVGAERLSFYLDWSRRETAVLFGDGAGAVVVEATDIPGGVLGYELN 179
           A   IKSGQ KK LV+GAE L+  +DW+ RET VLFGDGAGAVV+EA+  P G+    L+
Sbjct: 125 ADKFIKSGQSKKALVIGAETLTRMVDWNERETCVLFGDGAGAVVLEASSEP-GIYATCLH 183

Query: 180 NDPDGRDILKAGFGTAMDRFSADSLDFYIQFDGQEIFKRAINGMNKLSTQVLEKCGVDKD 239
            D   +++L    G +            I+  G+E+FK A+  ++ L  + L+  G+D+ 
Sbjct: 184 ADGGYKELLYNPVGVSAGFKDEPGHGVRIRMAGREVFKVAVKTLDSLVGETLQAAGMDES 243

Query: 240 EVDLVIPHQANERIIDTLVSRMKIPKEKAFVNIANYGNTSAATIPIAICDALEKGLIKPN 299
           +VD +IPHQAN RII+    R+ +  E+  V +  + NTS+ ++P+A+  A+  G  +  
Sbjct: 244 QVDWLIPHQANLRIIEATAKRLNMSMERVIVTVDKHANTSSGSVPLALDYAVRSGKAQRG 303

Query: 300 QTILSCAFGAGLTSAALLLQW 320
           Q +L  AFG G T A+ LL++
Sbjct: 304 QNLLLEAFGGGFTWASALLRY 324