Pairwise Alignments

Query, 354 a.a., 3-oxoacyl-(acyl-carrier-protein) synthase III, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 324 a.a., 3-oxoacyl-(acyl-carrier-protein) synthase III (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  243 bits (619), Expect = 7e-69
 Identities = 127/325 (39%), Positives = 204/325 (62%), Gaps = 13/325 (4%)

Query: 4   ATITGWGKCVPPATLTNDDLATFIETSDEWIKSRTGISQRHISH--VNTSELASVAAKRA 61
           A +TG G  +P   + N +L T ++T+DEWI++R+GI +RH +     TS+LA+ AA+ A
Sbjct: 5   AVVTGVGHYLPSRVVPNSELETLVDTTDEWIRTRSGIERRHFAADGEQTSDLATAAAQAA 64

Query: 62  LAAAGIEGSEIDMIILASASPDTLIPNIASTVQANIGANCA-AFDINAACSGFLYGLGLA 120
           L  A +   ++D +I+A+++PD   P +A+ VQA +G     A+D+ A C+GF++ +  A
Sbjct: 65  LDHAELTAQDVDAVIVATSTPDLTFPAVATMVQARLGMTRGFAYDVQAVCAGFVFAMANA 124

Query: 121 SSQIKSGQCKKVLVVGAERLSFYLDWSRRETAVLFGDGAGAVVVEATDIPGG-----VLG 175
           ++ I SGQ  ++LV+GAE  S  +DW+ R T VLFGDGAGAVV+EA D  GG     +L 
Sbjct: 125 NAMILSGQADRILVIGAETFSRIMDWTDRSTCVLFGDGAGAVVLEARDGTGGTADRGILS 184

Query: 176 YELNNDPDGRDILKAGFGTAMDRFSADSLDFYIQFDGQEIFKRAINGMNKLSTQVLEKCG 235
            +LN+D   RDIL    G +  + +      Y++ +G+E+F+ AI  +   +   L K G
Sbjct: 185 ADLNSDGRHRDILYVDGGVSSSQTAG-----YLRMEGKEVFRHAIEKLAATAETALAKAG 239

Query: 236 VDKDEVDLVIPHQANERIIDTLVSRMKIPKEKAFVNIANYGNTSAATIPIAICDALEKGL 295
           + + +VD V+PHQAN RII     +M I  ++  V +A++GNTSAA+IP+A+   + +G 
Sbjct: 240 LTEADVDWVVPHQANLRIITATARKMGIGMDRVVVTVADHGNTSAASIPMALSVGVARGQ 299

Query: 296 IKPNQTILSCAFGAGLTSAALLLQW 320
           IKP   +++ A G GL+  +++L+W
Sbjct: 300 IKPGDLVVTEAIGGGLSWGSVVLRW 324