Pairwise Alignments

Query, 223 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 230 a.a., Predicted regulator PutR for proline utilization, GntR family from Pseudomonas fluorescens FW300-N2E2

 Score =  123 bits (308), Expect = 3e-33
 Identities = 75/210 (35%), Positives = 109/210 (51%), Gaps = 4/210 (1%)

Query: 6   PIVHKTRTQLVVEVLREKILSGEIAAGEPLRQTALAEALHVSRIPVREALLQLEAEGLVK 65
           PI       ++ E LRE IL G +  G  LRQ  LA+   VSR+PVREAL QLEA+ L+ 
Sbjct: 16  PIPADQARSIIEESLREAILDGRLPCGTALRQQELADLFGVSRMPVREALRQLEAQSLLN 75

Query: 66  FEPHKGATATELSVAQVTELFELRAMIETDLLAKAIPQLQAEDLIKAERVLEQLESAFKH 125
              HKGA    L      E + LR+++E+  L  +IP L   DL  A + +EQLE+  +H
Sbjct: 76  VVQHKGAVVAPLITNNAVETYALRSVLESFALRLSIPLLDDSDLAMAAQYIEQLETETEH 135

Query: 126 EDAVASWSELNTQFHTCLYQAANRPHTLEVVHGLNTNCDRYIRLQLLLAGGIPAAEHEHR 185
               A   +LN  FH  LY  A     L+++       +R++R  L   G    ++ +HR
Sbjct: 136 ----AEIGKLNRLFHMSLYHKAPNSKLLDLIERELNEEERFLRFHLSSMGLGKLSQDDHR 191

Query: 186 ELLNYCKQRETEKATALLRHHILHAATTIR 215
            LL   + ++ +KA  LL  H+  A+ T+R
Sbjct: 192 ALLEAARAKDIDKAIVLLERHLEKASVTMR 221