Pairwise Alignments

Query, 297 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 301 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score =  167 bits (424), Expect = 2e-46
 Identities = 99/289 (34%), Positives = 154/289 (53%), Gaps = 6/289 (2%)

Query: 5   LPPLNALRAFESAARLQSITLASKELHVTHGAISKQIRVLEDFLGFALFVRLHKKVELTD 64
           LP + AL+ FE+  R  S T A++EL++T  A+SKQ+  LE+ +   LF R+ ++++LT 
Sbjct: 7   LPSIAALQCFEAVTRHLSFTRAAEELNLTQSAVSKQVAQLEELVQHLLFQRVRRRLQLTP 66

Query: 65  EAKRYFPHVQAALQTLSSATADLRSQGSRPQTLAINVLPSLTINWLIPRMEQFKSRYPHL 124
               Y   V+  L  +  +T  LRS G   + L ++   +    WL+PR++ ++ R+PH+
Sbjct: 67  AGALYLAEVRKILTQIEMSTHFLRSYGGETEVLRVSTPSTFGARWLVPRLKGWRLRHPHI 126

Query: 125 YVDLSIGDFAVDFSQGRYDIAIRSSTKLPKGVNYIKLMDEDLCLVCAPSLAP--KLQCIE 182
           ++DL     + D  +GR D++         G   +KL  E+L  VCAP   P   L    
Sbjct: 127 HLDLINEQESDDLIKGRCDVSFYFGQAAMPGAESVKLFGEELVPVCAPESLPDEPLADPT 186

Query: 183 DINHVTLLKHTTRPELWDYWAEKVGLVLTQEQTFG--VEHFYMLSQAAASGMGAALIPRF 240
            ++ + LL++  RPE W  W E  G   T     G   E FYM  +AA  G G AL+PRF
Sbjct: 187 QLSELVLLQNAFRPEAWHEWFESQG-YHTDHSYHGPRFETFYMCIRAAQVGCGVALLPRF 245

Query: 241 FIEEQLANGSLVIPFHSTFTSP-YVYYLLTPKSPSLPLKVQAFIEWMLD 288
            +EE+LA G LVI +     S    YYL  P+  +   K++ F++WML+
Sbjct: 246 LVEEELAEGKLVIAWDYALPSTNSAYYLSYPEHTADVPKIRVFLQWMLE 294