Pairwise Alignments

Query, 297 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 317 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  159 bits (403), Expect = 6e-44
 Identities = 102/300 (34%), Positives = 155/300 (51%), Gaps = 16/300 (5%)

Query: 1   MFTSLPPLNALRAFESAARLQSITLASKELHVTHGAISKQIRVLEDFLGFALFVRLHKKV 60
           M   LPPLNALRAFE+AAR    T A++ELHVT  A+S Q++ LED LG +LF RL K +
Sbjct: 1   MVRRLPPLNALRAFEAAARHGGFTGAARELHVTPAAVSHQVKGLEDALGVSLFHRLAKGL 60

Query: 61  ELTDEAKRYFPHVQAALQTLSSATADLRSQGSRPQTLAINVLPSLTINWLIPRMEQFKSR 120
           ELT   + Y P + A    L+ A+  L+ +G+    L ++VLPS    WL PR+  F  R
Sbjct: 61  ELTAAGRAYLPELTAGFDQLARASERLK-RGALVGRLTVSVLPSFAAGWLAPRLASFLRR 119

Query: 121 YPHLYVDLSIGDFAVDFSQGRYDIAIRSSTKLPKGVNYIKLMDEDLCLVCAPSL---APK 177
           YP + +DL      VDF + R D+ IR    +  G+   ++++E++  +CAP+L      
Sbjct: 120 YPDILLDLRSTPRTVDFIRERVDLGIRYGGGIYPGLASYRILEEEVFPICAPALLNGPVP 179

Query: 178 LQCIEDINHVTLLKHTTRPEL--------WDYWAEKVGLV-LTQEQTFGVEHFYMLSQAA 228
           L+   D+ H  LL     P +        W+ W  + G+  +  E   G      +  A 
Sbjct: 180 LRGFADLRHHVLLHD---PGILPGEPWTGWEPWLAEAGVTDIDLEAGHGFTESIAMIHAC 236

Query: 229 ASGMGAALIPRFFIEEQLANGSLVIPFHSTFTSPYVYYLLTPKSPSLPLKVQAFIEWMLD 288
            +G+G  +     + E L +G LV PF  +  + + Y+++ P       K  AFI W+L+
Sbjct: 237 VAGLGVGIGRSGLVTELLRSGRLVRPFPVSRPADFSYWVVVPPPSQTNPKAAAFIGWLLE 296