Pairwise Alignments

Query, 297 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 305 a.a., transcriptional regulator GcvA from Ralstonia sp. UNC404CL21Col

 Score =  188 bits (478), Expect = 1e-52
 Identities = 112/285 (39%), Positives = 155/285 (54%), Gaps = 4/285 (1%)

Query: 5   LPPLNALRAFESAARLQSITLASKELHVTHGAISKQIRVLEDFLGFALFVRLHKKVELTD 64
           LPPLNA+RAFESAAR  S T A +EL+VTHGAIS+QI+ LE +LG  LF RL+++VELTD
Sbjct: 4   LPPLNAVRAFESAARHLSFTRAGEELNVTHGAISRQIQALEAWLGVPLFRRLNRRVELTD 63

Query: 65  EAKRYFPHVQAALQTLSSATADLRSQGSRPQTLAINVLPSLTINWLIPRMEQFKSRYPHL 124
             +RY   +  AL  +S+A+  LR   +  + L +N +P+ T+ WLIPR+  F+ R+P +
Sbjct: 64  AGQRYLSEIGVALDRISTASQALRDCDA-VRILRVNSIPTFTMRWLIPRLSTFQMRFPRV 122

Query: 125 YVDLSIGDFAVDFSQGRYDIAIRSSTKLPKGVNYIKLMDEDLCLVCAPSLAPKLQCI--E 182
            V L+     ++     +D+ IR   ++  G    + +DE    VC+P L  +L      
Sbjct: 123 EVRLTTSIEEIEDLPDHFDVIIRGGPEIHAGFQSGRFLDESRFPVCSPRLLERLPLAAPS 182

Query: 183 DINHVTLLKHTTRPELWDYWAEKVGLV-LTQEQTFGVEHFYMLSQAAASGMGAALIPRFF 241
           D+ H TLL   T P +W  W    G+  L        EHFY+  QAA  G+G A+ P   
Sbjct: 183 DLRHHTLLHSDTLPSVWPSWLVLAGVPNLRPAHALTFEHFYLSIQAAIDGLGVAMGPSAL 242

Query: 242 IEEQLANGSLVIPFHSTFTSPYVYYLLTPKSPSLPLKVQAFIEWM 286
           I E L  G LV PF         YY  +P        VQAF  W+
Sbjct: 243 ITEDLEEGRLVAPFPDLALVARSYYWYSPARNLGDDVVQAFCAWL 287