Pairwise Alignments

Query, 297 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 322 a.a., XRE family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  160 bits (404), Expect = 5e-44
 Identities = 107/288 (37%), Positives = 156/288 (54%), Gaps = 7/288 (2%)

Query: 5   LPPLNALRAFESAARLQSITLASKELHVTHGAISKQIRVLEDFLGFALFVRLHKKVELTD 64
           LP LNA++AFE+AAR +S + A+ EL VTHGA+S QIR LE  LG +LF R  K+V LT+
Sbjct: 6   LPALNAIKAFEAAARHESFSRAADELFVTHGAVSHQIRALEADLGVSLFARDGKRVRLTE 65

Query: 65  EAKRYFPHVQAALQTLSSATADLRSQGSRPQTLAINVLPSLTINWLIPRMEQFKSRYPHL 124
             +RY  HV++AL  L+ AT ++R+ G R + L +++L S    W+ PR+  F   +P  
Sbjct: 66  TGRRYATHVRSALMALADATREIRA-GDRERRLVVSMLSSFAARWVTPRVGSFIEAHPQW 124

Query: 125 YVDLSIGDFAVDFSQGRYDIAIRSSTKLPKGVNYIKLMDEDLCLVCAPSL-APKL-QCIE 182
            ++L   +   DF++   D+AIR       G++   L++E     CAP+    KL Q   
Sbjct: 125 DLELLSTNALTDFARDDVDVAIRFGFGKYPGLHSELLLEEIFFPACAPNFNGGKLPQTPA 184

Query: 183 DINHVTLLKHTTRPELWDYWAEKVGLVLTQEQTFGV--EHFYMLSQAAASGMGAALIPRF 240
           D+  VTLL+  +  ELW  W +  GL    E   GV  +    L QAA  G G AL  R 
Sbjct: 185 DLAKVTLLR--SDDELWRPWFDAAGLTEWPEPKRGVLYQDSSNLLQAAIDGQGVALTRRS 242

Query: 241 FIEEQLANGSLVIPFHSTFTSPYVYYLLTPKSPSLPLKVQAFIEWMLD 288
               ++A G LV  F     SP+ YY +         +V+AF +W+ +
Sbjct: 243 LAMPEIAAGRLVRLFDVDGPSPWQYYFICTPQMLETARVKAFRDWVFE 290