Pairwise Alignments

Query, 256 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 257 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  145 bits (366), Expect = 8e-40
 Identities = 85/241 (35%), Positives = 133/241 (55%), Gaps = 3/241 (1%)

Query: 11  ALLFGVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAVALGTNKLQACGGSFFASLYFVRK 70
           A+L     +AGFID+IAGGGGLL+IPAL+  G+PP  ALGTNKL A  GS  A+  + RK
Sbjct: 11  AILAATGFIAGFIDAIAGGGGLLSIPALLTIGIPPHTALGTNKLAASFGSSMAAFTYYRK 70

Query: 71  GLVDLKTVKLALFCAFIGAALGTVLVQLVDTKILELVLPFLILAIGCYFLFSKKVSEEDR 130
                +    A    FIGA +GT +V L+D + LE  LP  I+A+  Y L          
Sbjct: 71  QFFTPRFWYHASIATFIGAVIGTFVVYLIDNQWLEKWLPLFIIAVALYTLLKPNAMGCPT 130

Query: 131 HQ--VLTPTVF-AFTAALGVGLYDGFFGPGTGSFFALAFVTLAGFGLAKATAHAKVLNFS 187
           ++  V  P+ F  +   + +G YDGF GP TG+F+ ++ V+     +  +   A+ +   
Sbjct: 131 YEPPVKAPSKFKQWRQGIPLGFYDGFAGPATGAFWTISSVSQYKLPVLNSCGLARAMTLI 190

Query: 188 TNIASLIFFALGGKVIWLLGLVMLAGQAIGATLGSRLVVTKGTKIIKPLVVTMSLAMSLK 247
           +N+ SL  F   G+V  ++GL M     +G+ +G+R  +  G   I+PL +++ + +++ 
Sbjct: 191 SNLTSLSVFLALGQVNLMVGLSMGLCMMLGSFIGARTAIKFGVPFIRPLFISIVILIAIN 250

Query: 248 L 248
           L
Sbjct: 251 L 251