Pairwise Alignments

Query, 315 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 748 a.a., Cyclic nucleotide-binding domain (cNMP-BD) protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 84.3 bits (207), Expect = 8e-21
 Identities = 80/268 (29%), Positives = 114/268 (42%), Gaps = 31/268 (11%)

Query: 5   TNPTIGIALGSGAAKGWAHIGVLNGLAAMGIKPDKVAGCSVGALVGAAYAHN-HLAELEE 63
           T   +G+ L  G A+G+AHIGVL  L   G+  D V G S+GALV A YA    L  + +
Sbjct: 466 TGRAVGVVLSGGGARGFAHIGVLRALEEAGVPVDVVGGTSIGALVAALYAKGMGLDRITD 525

Query: 64  WVRSFSSWDVLGLMDIRWRKGGLIGGEKVFDVLQSRIGDVNIEDLEYPFAAIATDLYSGQ 123
            + +     V     I      L  G +    L+    D+ I DL+  F +++ +L + +
Sbjct: 526 AIMAM----VKRSEQITLPMVALTSGRRFTQGLRELFSDLLIRDLDRTFFSVSCNLTTAE 581

Query: 124 EIWFRHGDLRQAVRASCSMPGILAPVRQGERWLVDGAVVNPVPVSVSRAMGVDIVIAVDL 183
               R G + QAV AS S PG+  PV       VDG ++N +P+ V   +          
Sbjct: 582 TKVHRDGPVWQAVLASNSPPGLFPPVVIDNELYVDGGLLNGLPIDVMMQLN--------- 632

Query: 184 HGFHSGRLQVLPVNMTSHRATKEDTEMPARQETGFMDLFARGREYVSNLTDKFSLGTKSN 243
                GRL V  VN  +  A  E        E G       G E      + F L   + 
Sbjct: 633 ---EGGRLIVSDVNANATMAAAE------CHEDGL-----SGWEVAWRKANPF-LDPVAM 677

Query: 244 PGMIAVMSQSM--GILEQRHKRARLMGD 269
           PG+  ++ +SM  G L QR K  R   D
Sbjct: 678 PGIREIIGRSMAIGSLAQRKKVLRRKTD 705