Pairwise Alignments

Query, 236 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 248 a.a., Response regulator of the LytR/AlgR family from Pseudomonas stutzeri RCH2

 Score =  102 bits (254), Expect = 7e-27
 Identities = 76/243 (31%), Positives = 124/243 (51%), Gaps = 17/243 (6%)

Query: 5   LIVDDELFAREELADSLSQEADIEIIGQC-SNAIEALQTITKEKPQLVFLDIQMPRISGM 63
           LIVDDE  ARE L+  +       ++    SN  EAL  I + +P +V LDI+MP + G+
Sbjct: 4   LIVDDEPLARERLSRLVGDLDGYRVLEPAASNGEEALTLIEELRPDVVLLDIRMPGLDGL 63

Query: 64  ELIAML-DPDTLPKIVFVTAFDEFAVKAFDNHAFDYLLKPIDADRLSKTLKRVRKD---- 118
           ++ A L + D  P ++F TA DEFA++AF   A  YL+KP+  + L++ LK+  +     
Sbjct: 64  QVAAKLCETDAPPAVIFCTAHDEFALEAFQVSAVGYLVKPVRPEHLTEALKKAERPNRVQ 123

Query: 119 ----LTPQAVNLIAPRSLEHLPCYSGSKLKVIPIQDVEYVFSDLSGIHVACTKGKVHTQL 174
                 P AV+   PRS  H+   +   +++IP+  V Y  +D   + +    G+V    
Sbjct: 124 LAALTRPAAVSGAGPRS--HISARTRKGIELIPLDHVIYFIADHKYVTLRHIGGEVLLDE 181

Query: 175 TLKVLEEK--TPLVHCHRQYLISPKAIAEIELLDTG---AEVTTLLGDKVPVSRRYLKSL 229
            LK LE++     V  HR  L+    I  ++    G     +  L G+ + VSRR++  +
Sbjct: 182 PLKSLEDEFGERFVRIHRNALVFRDRIERLQRTPLGHFQLFLKGLEGEALTVSRRHVAGV 241

Query: 230 KQL 232
           ++L
Sbjct: 242 RKL 244