Pairwise Alignments

Query, 236 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 248 a.a., Two-component response regulator AlgR from Pseudomonas syringae pv. syringae B728a

 Score =  103 bits (258), Expect = 2e-27
 Identities = 73/241 (30%), Positives = 124/241 (51%), Gaps = 13/241 (5%)

Query: 5   LIVDDELFAREELADSLSQEADIEIIG-QCSNAIEALQTITKEKPQLVFLDIQMPRISGM 63
           LIVDDE  ARE L+  +++     ++    SN  EAL  I   KP +V LDI+MP + G+
Sbjct: 4   LIVDDEPLARERLSRMVNEIEGYRVLEPSASNGEEALALIEAHKPDVVLLDIRMPGLDGL 63

Query: 64  ELIAML-DPDTLPKIVFVTAFDEFAVKAFDNHAFDYLLKPIDADRLSKTLKRVRKDLTPQ 122
           ++ A L + +  P +VF TA DEFA++AF   A  YL+KP+ ++ L + L++  +    Q
Sbjct: 64  QVAARLCEREAPPAVVFCTAHDEFALEAFQVSAVGYLVKPVRSEHLVEALRKAERPNRVQ 123

Query: 123 AVNLIAPRS------LEHLPCYSGSKLKVIPIQDVEYVFSDLSGIHVACTKGKVHTQLTL 176
              L  P +        H+   +   +++IP+  V Y  +D   + +    G+V     L
Sbjct: 124 LAALTRPAAESGSGPRSHISARTRKGIELIPLDQVIYFIADHKYVTLRHEGGEVLLDEPL 183

Query: 177 KVLEEK--TPLVHCHRQYLISPKAIAEIELLDTG---AEVTTLLGDKVPVSRRYLKSLKQ 231
           K LE++     V  HR  L++ + I  ++    G     +  L GD + VSRR++  +++
Sbjct: 184 KALEDEFGDRFVRIHRNALVARERIERLQRTPLGHFQLFLRGLNGDALIVSRRHVAGVRK 243

Query: 232 L 232
           +
Sbjct: 244 M 244