Pairwise Alignments

Query, 236 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 228 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  100 bits (249), Expect = 2e-26
 Identities = 69/231 (29%), Positives = 118/231 (51%), Gaps = 14/231 (6%)

Query: 1   MITCLIVDDELFAREELADSLSQEADIEIIGQCSNAIEALQTITKEKPQLVFLDIQMPRI 60
           MI C+IV+D   A ++L + +S+   +++ G   N ++A   +      L+FLDIQM + 
Sbjct: 1   MINCIIVEDAPLAVDKLKNFISKVPLLDLAGTFDNGLDAFDFLQSNTIDLLFLDIQMEQF 60

Query: 61  SGMELIAMLDPDTLPKIVFVTAFDEFAVKAFDNHAFDYLLKPIDADRLSKTLKRVRKDLT 120
           +G++L+  L   T P I+ V+A+ E+AV+ F+    DYLLKP   +R    LK V K  T
Sbjct: 61  TGLQLLQAL--HTRPHIIIVSAYGEYAVQGFEYDVTDYLLKPYSFERF---LKAVNKVQT 115

Query: 121 PQAVNLIA-PRSLEHLPCYSGSKLKVIPIQDVEYVFSDLSGIHVACTKGKVHTQLTLKVL 179
             A N  A P   +++   +  ++  I + D+ Y+    + +HV     ++ T L+ K +
Sbjct: 116 EMASNPPAQPLPKDYIFLKTEYRMVRINLCDILYIEGKGAYLHVITDTTRIMTLLSFKEI 175

Query: 180 EEKTP---LVHCHRQYLISPKAIAEIELLDTGAEVTTLLGDKVPVSRRYLK 227
           E   P    +  H+ YLI+   I  IE       V  +   ++P+ + YLK
Sbjct: 176 ESLLPAKQFIRIHKSYLIAINKIDNIE-----RNVVKIANMRIPIGKSYLK 221