Pairwise Alignments

Query, 522 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 324 a.a., peptidase M20 from Pedobacter sp. GW460-11-11-14-LB5

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 33/211 (15%)

Query: 262 NSYNVVATLAGSQQADEHILFTGHWDHIGKDDSKEGDKIYNGAMDNASGIAGILEIARQL 321
           N  N++  + G  +    I+ + H+DH+G       D+++NGA DNASG AG+L+IA   
Sbjct: 96  NGTNIIGYIPG--KGSNVIVVSAHYDHLGVVK----DEVFNGADDNASGTAGLLKIAAYF 149

Query: 322 ADNATQGHGLARSVTFIATTGEEQGLLGSRYYAANPIYPIDKTVAVLNLDSTNIYGKTKD 381
           A N         ++ F +   EE GL G++ +  NP  PI+     LN+D  +   K + 
Sbjct: 150 AKNKPN-----NTIIFASFDAEEMGLQGAKAFVGNPPVPINTIAIDLNMDMISHSDKGEL 204

Query: 382 FTIVGKGKSELENYLIDAAKQQNRIALGEKNPASG---GFFRSDHFSFAKLGVPAVFAGG 438
           +        +L+ Y +D  K   ++  G  +P  G      +SD  +F    +P ++ G 
Sbjct: 205 YVCGTFKYPDLKKY-VDTTKTNIKLLFGHDDPKQGHDDWTNQSDQGAFNAKNIPFLYFG- 262

Query: 439 GSEPIDAATADYKTQMQATMKGCYHNVCDEY 469
                     D+K          YH   DEY
Sbjct: 263 --------VEDHKD---------YHKATDEY 276



 Score = 35.8 bits (81), Expect = 2e-06
 Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 3   EARFRNDIKNLSSDEFEGRAPTTQGEKLTLDYLSKAFTEMGLKGAYQG-SFLQPVPMVSY 61
           + +   D++ LSSD ++GR   T+G ++   Y+ + F ++GLK   Q  ++ Q       
Sbjct: 31  DTQLLKDVEVLSSDAYQGRKTGTKGAEMARAYIIERFQKLGLKSYPQHVNYAQEFTFNGR 90

Query: 62  TADEAQQVTLAG-LPFKYRQDLVLSSRHDNGGV 93
              +     + G +P K    +V+S+ +D+ GV
Sbjct: 91  GNAKINGTNIIGYIPGKGSNVIVVSAHYDHLGV 123