Pairwise Alignments

Query, 522 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 585 a.a., M28 family metallopeptidase from Lysobacter sp. OAE881

 Score =  450 bits (1158), Expect = e-131
 Identities = 246/539 (45%), Positives = 324/539 (60%), Gaps = 26/539 (4%)

Query: 1   MNEARFRNDIKNLSSDEFEGRAPTTQGEKLTLDYLSKAFTEMGLKGAYQGSFLQPVPMVS 60
           +N A F   +K L+SDEFEGRAP + GE+ T+ YL   F  MGLK     S+ Q VPMV 
Sbjct: 54  INAADFAQHVKVLASDEFEGRAPGSAGEEKTVQYLEAQFKRMGLKPGNGDSYFQTVPMVE 113

Query: 61  YTADEAQQVTL--AGLP--FKYRQDLVLSSRHDNGGVNIENAPLVFVGYGVNAPEYAWND 116
            TADE+  +T+   G P   K+  D+V+ +R     V ++ + LVFVGYGVNAPE  WND
Sbjct: 114 TTADESTTLTIDAKGKPRTLKFGDDMVVGTRTGREEVKVDGSQLVFVGYGVNAPEQNWND 173

Query: 117 YQDLDMKGKIAVILVNDPGFARPDSGKFNGKAMTYYGRWSYKFEEASRQGALGALLIHDT 176
           Y  +D+KGK  V+ VNDPGF   D   F GK MTYYGRW+YKFEEA+RQGA  A++IHDT
Sbjct: 174 YAGVDVKGKTVVMFVNDPGFHSQDPKLFEGKRMTYYGRWTYKFEEAARQGAAAAIIIHDT 233

Query: 177 EPASYPWSVVENSWTGPQQDLVLSKAEQDSRVQVEGWLTLDTATKLFEKAGLSLPTLMAR 236
           E ASY W VV+NSW+G Q DL L+K + + R+ V+GW+T D A  L    G +L  L  +
Sbjct: 234 EGASYGWDVVKNSWSGAQFDL-LAKDDPEPRLPVQGWITGDAARSLLADLGQNLDELY-K 291

Query: 237 AADSP--INLPLEQTANIAFKNKAEYANSYNVVATLAGSQQADEHILFTGHWDHIG---- 290
           AA+ P    +PL+   ++  K+K    +S NVVA L G+++ DE I++  HWDH+G    
Sbjct: 292 AANKPGFKAIPLDGKLSVGLKSKTSEKSSRNVVALLPGAKRPDEAIVYMAHWDHLGNHAH 351

Query: 291 --------KDDSKEGDKIYNGAMDNASGIAGILEIARQLADNATQGHGLARSVTFIATTG 342
                          D IYNGA+DNASG+AGILEIA   +          RS+ F+A T 
Sbjct: 352 EADEHGGASGGEPHADTIYNGAIDNASGVAGILEIAEAFSKQTPPPD---RSLLFLAVTL 408

Query: 343 EEQGLLGSRYYAANPIYPIDKTVAVLNLDSTNIYGKTKDFTIVGKGKSELENYLIDAAKQ 402
           EE GLLGS+YY A+P  P++KTVAV+NLD+  + GK KD T+VG G SELE+ L   A+ 
Sbjct: 409 EESGLLGSKYYVAHPTIPLNKTVAVINLDAMPVIGKAKDMTVVGFGSSELEDLLKTQAES 468

Query: 403 QNRIALGEKNPASGGFFRSDHFSFAKLGVPAVFAGGGSEPIDAATADYKTQMQATMKGCY 462
           Q R+   E  P  G +FRSDHF+FAK GVPA++A GGS+ ++      +          Y
Sbjct: 469 QQRVLHAEATPEDGFYFRSDHFNFAKAGVPALYAKGGSDLLEGGVDGGRKAESDYRDNRY 528

Query: 463 HNVCDEYREDWDLSGAIQDLEVYYQVTRELGNSQDWPGYYPGTEFNNLRPAKTPLAKAA 521
           H   D++   W + G +QDLE  Y V R L   + WP +Y G  F   R A   L K+A
Sbjct: 529 HKPGDQFDPSWKMDGVVQDLEALYGVGRTLAGDEQWPNWYEGNAF---RGAHDKLMKSA 584