Pairwise Alignments

Query, 522 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 564 a.a., Predicted aminopeptidases from Sphingomonas koreensis DSMZ 15582

 Score =  197 bits (501), Expect = 9e-55
 Identities = 159/536 (29%), Positives = 254/536 (47%), Gaps = 55/536 (10%)

Query: 2   NEARFRNDIKNLSSDEFEGRAPTTQGEKLTLDYLSKAFTEMGLKGA-YQGSFLQPVPMVS 60
           ++A  +  +  L+SD  +GR   T   ++   Y++  F   GLK A   GS+LQPVP++S
Sbjct: 50  DQAAMKAHVMFLASDAMKGRESGTNEYEIAAQYVAAQFYAAGLKPAGVDGSYLQPVPLLS 109

Query: 61  YTADEAQQVTL-----AGLPFKYRQDLVLSSRHDNGGVNIENAPLVFVGYGVNAPEYAWN 115
           + A +   +T+     A +   + +D +     +     I+ A +VF GYG+ AP+Y  +
Sbjct: 110 FRAADKGTLTVTRSGAAPVSLVFGEDYIPGGNPERESTLID-AGVVFAGYGIVAPQYKRD 168

Query: 116 DYQDLDMKGKIAVILVNDPGFARPDSGKFNGKAMTYYGRWSYKFEEASRQGALGALLIHD 175
           DY+ +D+KGK+  I    PG        F+G+   ++G  + K   A+ +GA   +++  
Sbjct: 169 DYKGVDVKGKVVAIFSGAPG-------GFDGEERAHFGSNANKAAIAASKGAAAVIVLES 221

Query: 176 TEPASY-PWSVVENSWTGPQQDLVLSKAEQDSRVQVEGWLTLDT-----ATKLFEKAGLS 229
              A   P+S +   W   +  +  + A+ +  +  +G  T+ +     A KLF K    
Sbjct: 222 PSSAKVRPFSRMTEVWD--EWRMTWADAQGNGHLPAKGTPTIASVSLKGAGKLFGKDKGW 279

Query: 230 LPTLMARAADSPINLPLEQTANIA--FKNKAEYANSYNVVATLAGSQQA--DEHILFTGH 285
              + A  A  P   P   +A +A   K + +   S NV   + GS     DE ++ + H
Sbjct: 280 AAAVKAAEAGKPTIAPFASSATLAAALKTERKTVTSSNVAGIIPGSDPKLKDEVVVLSAH 339

Query: 286 WDHIG--KDDSKEGDKIYNGAMDNASGIAGILEIARQLADNATQGHGLARSVTFIATTGE 343
            DH+G  K D+K GD I+NGAMDNA GIA ++E A++       G    RS+ F+A T E
Sbjct: 340 LDHVGVGKADAK-GDTIHNGAMDNAMGIASLIEEAKRFQ---ASGKPPRRSIMFLAVTAE 395

Query: 344 EQGLLGSRYYAANPIYPIDKTVAVLNLDSTNIYGKTKDFTIVGKGKSELENYLIDAAKQQ 403
           E+GL+G+ Y+A NP  P    VA +NLD   I  K +D    G  +S L   ++  A   
Sbjct: 396 EKGLIGADYFAHNPTVPKANLVANVNLDMPVITYKFEDMIAFGAARSTL-GPIVARATAA 454

Query: 404 NRIALG-EKNPASGGFFRSDHFSFAKLGVPAVF-----AGGGSEPIDAATADYKTQMQAT 457
             + +G +  P  G F RSDH+ F + G+P+VF     AG G E  +   A         
Sbjct: 455 VGVGVGKDPMPEQGFFVRSDHYRFVQQGIPSVFLWPGMAGVGGEAFNRFLATR------- 507

Query: 458 MKGCYHNVCDEYRE---DWDLSGAIQDLEVYYQVTRELGNSQDWPGYYPGTEFNNL 510
               YH   DE       WD    ++ +E  Y + RE+ ++   P +  G  F  L
Sbjct: 508 ----YHRPSDEITNPEIKWD--QGVRFIEANYAIAREIADADARPAWNKGDFFGVL 557