Pairwise Alignments

Query, 442 a.a., tolB protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 427 a.a., tol-pal system beta propeller repeat protein TolB from Dechlorosoma suillum PS

 Score =  336 bits (862), Expect = 7e-97
 Identities = 196/449 (43%), Positives = 266/449 (59%), Gaps = 30/449 (6%)

Query: 1   MKILAKW-----LTLVVLLCTTPAKAALDIVITEGVDAARPIAVMPFQWQGAGAP--PQA 53
           M ++A++     L L +L     A A L I IT       PIA+  F    AG P   +A
Sbjct: 1   MTVIARYFSRVLLGLSLLAALGGAHAQLAIEITGAGAHRLPIAIADF----AGEPGYSRA 56

Query: 54  IADVVMSDLVRSGTFKPLDELGLPQRGIGALAQFDANAWTNVSAEALVVGSVKPYGADQF 113
           +  V+ +DL RSG F+ ++    P   I      D  AW N  A+A V GS+      +F
Sbjct: 57  LTSVIRADLERSGLFRLVEPGPTP---ISENDNVDFGAWKNKGADAFVGGSLVADAGGKF 113

Query: 114 LVSFELIDLVKAQNQALKGSANPTELLMDSRQTVISATQFRQYGHRISDIVYEKLTGIRG 173
              F L D+ K   QA  G              V +    R  GHRI+D +YEKL G +G
Sbjct: 114 EARFRLYDVSK---QASLGGV----------AFVTTPNMLRAAGHRIADYIYEKLIGEKG 160

Query: 174 AFLTRISYVVVNHSQKAAYSLMIADYDGYNEQMLLRSPEPLMSPAWSPDGRRLAYVSFEN 233
            F TRI+YVV    Q   Y L IAD DG N Q  L S EP++SPAWSPDG RLAYVSFEN
Sbjct: 161 YFSTRIAYVV---KQAGRYELQIADADGQNAQPALVSKEPIISPAWSPDGGRLAYVSFEN 217

Query: 234 KKAEIFVQDLYTQVRTKVSSFSGINGAPSFSPDGKSLAVTLSKDGQPEIYVIDIATKAIK 293
           KK  ++V  L T  RT V++F G N AP+++PDG+ LAVTLSKDG  +IY+++      +
Sbjct: 218 KKPVVYVHTLATGRRTVVANFKGSNSAPAWAPDGRRLAVTLSKDGGSQIYLVNADGSGAQ 277

Query: 294 RITNHYSIDTEPSWYPDGKSLLFTSERGGRPQLYRVDLNSGKVTRETFEGEWNLGGSITP 353
           R+ +  SIDTEP + PDG+S+ FTS+RGG PQ+YRV +  G   R TF+G +N+   ++P
Sbjct: 278 RLMSSSSIDTEPQFSPDGESIYFTSDRGGAPQIYRVSVGGGTAQRVTFDGSYNVSPRLSP 337

Query: 354 DGRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTTHQGKQVL 413
           DGRSM F++R  G+F +A MDL+++ +Q+LT +  DESPS A NG M+++ T   G+ VL
Sbjct: 338 DGRSMAFISRNGGRFQLAIMDLASKQVQILTDSHKDESPSFASNGRMILFATEMGGRGVL 397

Query: 414 AAVSTDGRFKARLPAGQGEVKSPSWSPFL 442
           +AVS+DGR K RL    G+V+ P+W P+L
Sbjct: 398 SAVSSDGRVKQRLSVSAGDVREPAWGPYL 426