Pairwise Alignments

Query, 442 a.a., tolB protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 446 a.a., Tol-Pal system beta propeller repeat protein TolB (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  124 bits (311), Expect = 6e-33
 Identities = 83/292 (28%), Positives = 137/292 (46%), Gaps = 4/292 (1%)

Query: 148 ISATQFRQYGHRISDIVYEKLTGIRGAFLTRISYVVVNHSQKAAYSLMIADYDGYNEQML 207
           I  TQ      R    + + LTG RG F  + +   V    K    + ++   G + + +
Sbjct: 153 IQETQLPDVADRFCSDLMKALTG-RGEFF-KSTLAFVKSGGKNKKDVWLSKPTGRDLRQI 210

Query: 208 LRSPEPLMSPAWSPDGRRLAYVSFENKKAEIFVQDLYTQVRTKVSSFSGINGAPSFSPDG 267
              P   MSP+WSPD R + +   +++   + V D  T+   ++         P+F PD 
Sbjct: 211 TNLPGEAMSPSWSPDARFIVFSHMDDRTHALGVWDRLTRQTQRIKFPGNTVIGPTFMPDN 270

Query: 268 KSLAVTLSKDGQPEIYVIDIATKAIKRITNHYSIDTEPSWYPDGKSLLFTSERGGRPQLY 327
           K +AV+LS    P I+++    +  + + +  SID  PS+   G  + F S R G PQ++
Sbjct: 271 K-VAVSLSTGKNPGIFLLSHVFQKERALEDSASIDVSPSFDATGTKMAFCSSRLGGPQIF 329

Query: 328 RVDLNSGKVTRETFEGEWNLGGSITPDGRSMIFVNRTNGKFNIARMDLSTRF-MQVLTST 386
             DL +G+VTR +  G +N   SI+PDG  + F   T+    I   D+ T+   QV    
Sbjct: 330 LKDLTTGQVTRISRSGNYNTAPSISPDGTLIAFARMTDFGHRIFVYDMVTQSERQVTFGP 389

Query: 387 RLDESPSVAPNGTMVIYGTTHQGKQVLAAVSTDGRFKARLPAGQGEVKSPSW 438
             DE+PS AP+   + + +T  G + +  ++  G    R+P G G+   P W
Sbjct: 390 GTDETPSFAPDSYFLAFTSTRSGAKQIYLITRHGGDAKRVPTGAGDASFPDW 441