Pairwise Alignments

Query, 442 a.a., tolB protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 431 a.a., Tol-Pal system protein TolB from Pantoea sp. MT58

 Score =  369 bits (948), Expect = e-107
 Identities = 194/435 (44%), Positives = 274/435 (62%), Gaps = 12/435 (2%)

Query: 8   LTLVVLLCTTPAKAALDIVITEGVDAARPIAVMPFQWQGAGAPPQAIADVVMSDLVRSGT 67
           L   +LL      A + I IT+GV+ ARPI V+PF+W G+GA P+ +  +V +DL  SG 
Sbjct: 9   LGFFILLWAAMLHAEVRIEITQGVNTARPIGVVPFKWAGSGAAPEDVGGIVAADLRNSGK 68

Query: 68  FKPLDELGLPQRGIGALAQFDANAWTNVSAEALVVGSVKPYGADQFLVSFELIDLVKAQN 127
           F PLD   LPQ+   A  +    AW+ +  +A+VVG V       + VS++L+D      
Sbjct: 69  FNPLDRSRLPQQPTSA-QEVQPAAWSALGIDAVVVGQVASNPDGSYQVSYQLVDT----- 122

Query: 128 QALKGSANPTELLMDSRQTVISATQFRQYGHRISDIVYEKLTGIRGAFLTRISYVVVNHS 187
               G A  T L  +S +  ++    R   H  SD  ++KLTGI+GAF TRI+YVV  + 
Sbjct: 123 ----GGAPGTVLAQNSYK--VTKQWLRYAAHTASDETFQKLTGIKGAFRTRIAYVVQTNG 176

Query: 188 QKAAYSLMIADYDGYNEQMLLRSPEPLMSPAWSPDGRRLAYVSFENKKAEIFVQDLYTQV 247
            +  Y L +ADYDGYN+ ++ RSP+PLMSPAWSPDG ++AYV+FE+ K+ + VQ L    
Sbjct: 177 GQFPYELRVADYDGYNQFVVHRSPQPLMSPAWSPDGSKVAYVTFESGKSALVVQTLSNGA 236

Query: 248 RTKVSSFSGINGAPSFSPDGKSLAVTLSKDGQPEIYVIDIATKAIKRITNHYSIDTEPSW 307
             +V+S+   NGAP+FSPDG  LA  LSK G   +YV+D+A+   +++T+     TEP+W
Sbjct: 237 IRQVASYPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQTRQVTDGRYNSTEPTW 296

Query: 308 YPDGKSLLFTSERGGRPQLYRVDLNSGKVTRETFEGEWNLGGSITPDGRSMIFVNRTNGK 367
           +PD ++L +TS++ G PQ+Y+V +N G   R T+EG  N    +  DG+SM+ ++   G 
Sbjct: 297 FPDSQTLAYTSDQAGAPQIYKVGINGGTPQRITWEGGQNQDADVATDGKSMVMISTNGGA 356

Query: 368 FNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTTHQGKQVLAAVSTDGRFKARLP 427
            ++A+ DL T  +Q LT T LDE+PS+APNGTMVIY +T     VL  VSTDGRFKARLP
Sbjct: 357 QHVAKQDLETGAVQTLTDTFLDETPSLAPNGTMVIYSSTQGMGSVLQLVSTDGRFKARLP 416

Query: 428 AGQGEVKSPSWSPFL 442
           A  G+VK P+WSP+L
Sbjct: 417 ATDGQVKFPAWSPYL 431