Pairwise Alignments

Query, 442 a.a., tolB protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 439 a.a., Tol-Pal system beta propeller repeat protein TolB from Dyella japonica UNC79MFTsu3.2

 Score =  311 bits (797), Expect = 3e-89
 Identities = 171/429 (39%), Positives = 253/429 (58%), Gaps = 23/429 (5%)

Query: 19  AKAALDIVITEGVDAARPIAVMPFQWQGAGAPPQAIADVVMSDLVRSGTFKPLDELGL-- 76
           A+ +L++ I +G+  A PIAV+PF   G    P  +ADV+ +D  RSG F+ L +  +  
Sbjct: 25  AQQSLNVDIVQGIKTATPIAVVPFAQAGGAPLPTDVADVIRNDFNRSGKFRSLAKSEIVE 84

Query: 77  -PQRGIGALAQFDANAWTNVSAEALVVGSVKPYGADQFLVSFELIDLVKAQNQALKGSAN 135
            P +G    A      W  +  + + +G +   G     V +EL D+ K Q+   +    
Sbjct: 85  TPSKG----ADIKFPTWRLLKQDFITIGRISDAGGGMLRVEYELWDVNKQQSLLAQAFTA 140

Query: 136 PTELLMDSRQTVISATQFRQYGHRISDIVYEKLTGIRGAFLTRISYVV-VNHSQKAAYSL 194
           P             A   R   H+I+D +YEK+TG+RGAF TRI+Y+  V       YSL
Sbjct: 141 P-------------AGDLRGVAHQIADQIYEKITGVRGAFWTRIAYITAVGLGNNTTYSL 187

Query: 195 MIADYDGYNEQMLLRSPEPLMSPAWSPDGRRLAYVSFENKKAEIFVQDLYTQVRTKVSSF 254
           ++AD DG+N Q++ RS E L+SP WSPDG+++AYVSFE+  + I+VQD+ T  R  VS+ 
Sbjct: 188 IVADSDGFNPQVVARSRESLLSPHWSPDGKKIAYVSFESGNSAIYVQDITTGQRQLVSAR 247

Query: 255 S-GINGAPSFSPDGKSLAVTLSKDGQPEIYVIDIATKAIKRITNHYSIDTEPSWYPDGKS 313
             GIN AP++SPDG  LAV+LS  G PEIYV+D+A++   R+T   +I+TEP W PDG+S
Sbjct: 248 PRGINSAPAWSPDGSKLAVSLSYSGNPEIYVMDVASRQETRLTKTLAINTEPVWSPDGQS 307

Query: 314 LLFTSERGGRPQLYRVDLNSGKVTRETFEGEWNLGGSITPDGRSMIFVNRTNGKFNIARM 373
           + FTS+R GRPQ+Y++  + G   R +F+G+ NL   ++ DG+ +  V      + IA M
Sbjct: 308 IYFTSDRSGRPQIYQMPASGGGANRISFQGQNNLSADVSYDGKQVAMVQGNGNVYRIAVM 367

Query: 374 DLST-RFMQVLTSTRLDESPSVAPNGTMVIYGTTHQGKQVLAAVSTDGRFKARLPAGQGE 432
           D S    ++ L+   +DESPS APN +M++Y  T   + VL AVS DG+ + RL    G+
Sbjct: 368 DRSLGGQVRPLSPGPIDESPSFAPNASMLLYAATEGRRGVLYAVSADGQVRQRLVLADGD 427

Query: 433 VKSPSWSPF 441
           V+ PSW P+
Sbjct: 428 VREPSWGPY 436