Pairwise Alignments

Query, 442 a.a., tolB protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 442 a.a., TolB domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  837 bits (2162), Expect = 0.0
 Identities = 419/442 (94%), Positives = 428/442 (96%)

Query: 1   MKILAKWLTLVVLLCTTPAKAALDIVITEGVDAARPIAVMPFQWQGAGAPPQAIADVVMS 60
           MKILAKWL L VLLCT PAKAALDIVITEGVDAARPIAVMPFQWQGAGAPPQAIADVVMS
Sbjct: 1   MKILAKWLALAVLLCTMPAKAALDIVITEGVDAARPIAVMPFQWQGAGAPPQAIADVVMS 60

Query: 61  DLVRSGTFKPLDELGLPQRGIGALAQFDANAWTNVSAEALVVGSVKPYGADQFLVSFELI 120
           DL+RSGTFKPLDELGLPQRGIGALAQFDA+AW NV AEA+VVGSVKPYG DQFLVSF+LI
Sbjct: 61  DLIRSGTFKPLDELGLPQRGIGALAQFDASAWANVGAEAVVVGSVKPYGTDQFLVSFDLI 120

Query: 121 DLVKAQNQALKGSANPTELLMDSRQTVISATQFRQYGHRISDIVYEKLTGIRGAFLTRIS 180
           DLVKAQNQALKG  + TE LMDSRQTVISA QFRQYGHRISDIVYEKLTGIRGAFLTRIS
Sbjct: 121 DLVKAQNQALKGPTSATEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGIRGAFLTRIS 180

Query: 181 YVVVNHSQKAAYSLMIADYDGYNEQMLLRSPEPLMSPAWSPDGRRLAYVSFENKKAEIFV 240
           YVVVNH+QKAAYSLMIADYDGYNEQMLLRSPEPLMSP+WSPDGRRLAYVSFENKKAEIFV
Sbjct: 181 YVVVNHTQKAAYSLMIADYDGYNEQMLLRSPEPLMSPSWSPDGRRLAYVSFENKKAEIFV 240

Query: 241 QDLYTQVRTKVSSFSGINGAPSFSPDGKSLAVTLSKDGQPEIYVIDIATKAIKRITNHYS 300
           QDLYTQVRTKVSSF GINGAP+FSPDGKSLAVTLSKDGQPEIYVIDIATKA KRITNHYS
Sbjct: 241 QDLYTQVRTKVSSFPGINGAPTFSPDGKSLAVTLSKDGQPEIYVIDIATKAAKRITNHYS 300

Query: 301 IDTEPSWYPDGKSLLFTSERGGRPQLYRVDLNSGKVTRETFEGEWNLGGSITPDGRSMIF 360
           IDTEPSWYPDGKSLLFTSERGGRPQLYRVDLNSGKVTRETFEGEWNLGGSITPDGRSMIF
Sbjct: 301 IDTEPSWYPDGKSLLFTSERGGRPQLYRVDLNSGKVTRETFEGEWNLGGSITPDGRSMIF 360

Query: 361 VNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTTHQGKQVLAAVSTDG 420
           VNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTT+QGKQVLAAVSTDG
Sbjct: 361 VNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTTYQGKQVLAAVSTDG 420

Query: 421 RFKARLPAGQGEVKSPSWSPFL 442
           RFKARLP GQGEVKSPSWSPFL
Sbjct: 421 RFKARLPVGQGEVKSPSWSPFL 442