Pairwise Alignments

Query, 250 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1007 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 54.7 bits (130), Expect = 7e-12
 Identities = 27/108 (25%), Positives = 56/108 (51%)

Query: 141 ERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQVFNTVVTRFSDSNK 200
           E +YD  I   ++ +K +P+S YA +A +      FNK +F ++K     +V ++  S+ 
Sbjct: 599 ENQYDAKIATMQSLLKAFPNSNYADDAGFETAYTYFNKGDFDKSKSDLVELVAKYPRSSY 658

Query: 201 RGDSLVKLGMIAEKTGDKAGATQYYQQVVKDYANSAAARIAQQQLAAI 248
              +LV +G++         A + +++V++DY  +  A+ A + +  I
Sbjct: 659 VAKALVTIGLVQYNQDQDDAALESFKKVIRDYPTADEAKQAMESIKNI 706



 Score = 40.8 bits (94), Expect = 1e-07
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 2/114 (1%)

Query: 118 ANAAASSLSETASYESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFN 177
           +NA  S L E A + +AV  +  E    DA   F+AFI+ YP +     A +++G+  FN
Sbjct: 67  SNAELSLLKENAKFYAAVCAL--ELTNSDAESLFQAFIRDYPLNPNTKLAYFYVGKTYFN 124

Query: 178 KSEFAEAKQVFNTVVTRFSDSNKRGDSLVKLGMIAEKTGDKAGATQYYQQVVKD 231
           +  + +A + F           +R +   K G    +  D   A   +++V K+
Sbjct: 125 QKNYKKALEWFEKTDPSTLSGKQRNEYQFKQGYAYFELKDYDKAEPLFEKVKKE 178



 Score = 31.6 bits (70), Expect = 7e-05
 Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 1/102 (0%)

Query: 123 SSLSETASYESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFA 182
           S+ ++ A +E+A     K   +D +       + +YP S Y A A   +G + +N+ +  
Sbjct: 619 SNYADDAGFETAYTYFNKG-DFDKSKSDLVELVAKYPRSSYVAKALVTIGLVQYNQDQDD 677

Query: 183 EAKQVFNTVVTRFSDSNKRGDSLVKLGMIAEKTGDKAGATQY 224
            A + F  V+  +  +++   ++  +  I    GD  G   Y
Sbjct: 678 AALESFKKVIRDYPTADEAKQAMESIKNIYVDRGDANGFIAY 719



 Score = 26.2 bits (56), Expect = 0.003
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 141 ERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNKSEFAEAKQVFNTVVTRFSDSNK 200
           ER + +A+  F    K   D+   A   YW  + ++   +F EA   F   + +  D++K
Sbjct: 450 ERAFPNALSMFLRSEKFPEDNEINALNTYWKAESMYELRKFGEAVTTFEKFL-KMPDADK 508

Query: 201 RG 202
            G
Sbjct: 509 TG 510



 Score = 25.4 bits (54), Expect = 0.005
 Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 3/84 (3%)

Query: 111 PAAVAATANAAASSLSETASYESAVN---LVLKERKYDDAIPAFRAFIKQYPDSVYAANA 167
           P A +A   A+  S  +    E+ +N   L  +   +  A+ A + F+K +P S     A
Sbjct: 342 PKAQSAFFRASRLSFDKGIQEEAWLNYAKLSYELEFHQQALEATQGFLKTFPKSRKINEA 401

Query: 168 NYWLGQLLFNKSEFAEAKQVFNTV 191
              LG++L     +  A  +   +
Sbjct: 402 KTLLGEVLLTTKNYQAAVDILEPI 425