Pairwise Alignments

Query, 250 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 261 a.a., tol-pal system protein YbgF from Ralstonia sp. UNC404CL21Col

 Score = 76.6 bits (187), Expect = 5e-19
 Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 32/265 (12%)

Query: 1   MKRAVLITAMFFGAGAAVAAPAPVEDLAGGSGDDRLARLERI----------------VK 44
           M++A+L+  +  G    +A PA     A G  DD  AR   I                + 
Sbjct: 13  MRQAILMATLVAGGALTMAGPA-----AAGVFDDDEARRAIIDMRDKFNNFQSTAAQRID 67

Query: 45  SRQQSEIDMQRRLDTLQQEVLDLRGLTEQQNYQIEQMQQRQRQLYDEIANLSSKATATPA 104
              ++ ID Q +++TL+ EV  LRG  E     ++ + ++Q+  Y ++     K      
Sbjct: 68  QNSKNLIDAQNQIETLKSEVARLRGQNEVLQNSVDTLTKQQKDYYADLDARLKKFE---- 123

Query: 105 ASVPATPAAVAATANAAASSLSETASYESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYA 164
                 P              +E   Y++A+    +   +  A   F AF+K+YP S Y 
Sbjct: 124 ------PQQATVDGREGMVQPNEKPEYDAALK-AFQGGDFKGAGNQFSAFVKKYPQSPYL 176

Query: 165 ANANYWLGQLLFNKSEFAEAKQVFNTVVTRFSDSNKRGDSLVKLGMIAEKTGDKAGATQY 224
             A +WLG  L+ + ++  +  V   +        K  D+L+++     ++G KA A + 
Sbjct: 177 PLAQFWLGNALYAQRDYKGSSYVLENMARTNPQHPKAPDALLQVATNQGESGQKAAARKT 236

Query: 225 YQQVVKDYANSAAARIAQQQLAAIK 249
            + V   Y  +  A+ AQ +L  ++
Sbjct: 237 LETVASQYPGTEQAKTAQSRLKTMR 261