Pairwise Alignments

Query, 250 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 249 a.a., Tol system periplasmic component YbgF from Burkholderia phytofirmans PsJN

 Score = 84.0 bits (206), Expect = 3e-21
 Identities = 66/251 (26%), Positives = 110/251 (43%), Gaps = 24/251 (9%)

Query: 12  FGAGAAVA--APAPVEDLAGGSGDDRLAR-----------LERIVKSRQQSEIDMQRRLD 58
           F A A VA  A A V   AG   DD+  +           L   + + Q++ +D   RLD
Sbjct: 10  FAAAACVAGTAFAAVPAHAGIFDDDQARQAILDLRSKTDSLSSQLSAAQRTILDQSNRLD 69

Query: 59  TLQQEVLDLRGLTEQQNYQIEQMQQRQRQLYDEIANLSSKATATPAASVPATPAAVAATA 118
            L Q+V  LRG  E    Q+  +Q++Q+  Y ++     K            P       
Sbjct: 70  QLNQQVATLRGQNEDMANQLATVQKQQKDYYTDLDTRLKKFE----------PQQQTVDG 119

Query: 119 NAAASSLSETASYESAVNLVLKERKYDDAIPAFRAFIKQYPDSVYAANANYWLGQLLFNK 178
                   ET S+ +A +   +   + +A  +FR FI ++P+S Y   A YWLG  L+  
Sbjct: 120 VQGEVQPGETDSFNAA-SQQFRNGDFKNAAASFRTFIAKFPNSPYQPTAQYWLGNALYAL 178

Query: 179 SEFAEAKQVFNTVVTRFSDSNKRGDSLVKLGMIAEKTGDKAGATQYYQQVVKDYANSAAA 238
            ++  +   +  VV ++    +  ++L+ +     + G KA A +  +Q+V  Y  S  A
Sbjct: 179 RDYKGSTATWQGVVQKYPQHPRAPEALLAIANNQLEQGQKAAAKKTLEQIVAQYGGSDVA 238

Query: 239 RIAQQQLAAIK 249
           + AQ +L+ IK
Sbjct: 239 QSAQSKLSQIK 249