Pairwise Alignments

Query, 211 a.a., transcriptional regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 218 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score = 63.9 bits (154), Expect = 2e-15
 Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 6/158 (3%)

Query: 55  DLSTVDL--QKAYQFQRLLARQHPSVRVVYIQFPKLVDARFLMQAPTTAGVFYLDAGLTE 112
           DL  VD    +A Q   L+ +      V  +        + + + P   GVFY  A    
Sbjct: 53  DLFLVDAGHSEAEQISSLIDQLDEQTPVALVNIVPEQAEQLVEKHPVIRGVFYSHATREH 112

Query: 113 ISLGLSNILRGH----RVIPIQLVNGVNDDFGLYEDTEPLTIREREVLQALLSGSTNLDI 168
           +  G+  +L+G     RV+  +L+        L E    LT+RERE+L     G +N +I
Sbjct: 113 LLEGIRVLLQGGDWLPRVLTERLLGQWRRMRQLAETKSSLTLREREILSLAGKGLSNAEI 172

Query: 169 ANQLFVSESTIKTHLYRVFRKIGVSSRGQAIAWAQTYL 206
           A QL +S  TIK+H++ + RKIG S+R +A    +++L
Sbjct: 173 AEQLCLSPHTIKSHIHNLLRKIGASNRAEAAYLLRSHL 210