Pairwise Alignments

Query, 211 a.a., transcriptional regulator, LuxR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 226 a.a., response regulator transcription factor from Synechocystis sp000284455 PCC 6803

 Score = 55.1 bits (131), Expect = 1e-12
 Identities = 50/170 (29%), Positives = 75/170 (44%), Gaps = 17/170 (10%)

Query: 30  VKLSQVSPDEMCDQIKDNQASMVVIDLSTVDLQKAYQFQRLLARQHPSVRVVYIQFPKLV 89
           V L  +   E C QIK     + V+ L T   Q A    RL+  Q     V  +    LV
Sbjct: 61  VGLPGIGGIEACHQIKKIHPQLPVLIL-TSHSQPAL-INRLIEAQAQGYCVKGVAAETLV 118

Query: 90  DARFLMQAPTTAGVFYLDA-GLTEISLGLSNILRGHRVIPIQLVNGVNDDFGLYEDTEPL 148
               L      AG F+ DA    EI     +      V+P+   +G N          PL
Sbjct: 119 ----LAIRSVAAGAFWWDAIASQEIQTAFQHSSSTGAVLPLADADGEN----------PL 164

Query: 149 TIREREVLQALLSGSTNLDIANQLFVSESTIKTHLYRVFRKIGVSSRGQA 198
           T RE E+L  +  G +N +IA++L+++  T++ H++ + RK+ V  R QA
Sbjct: 165 TKRELEILSLVAKGKSNQEIADELYIAPGTVRVHVHTILRKLEVRDRTQA 214