Pairwise Alignments

Query, 197 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 144 a.a., Membrane protein, distant similarity to thiosulphate:quinone oxidoreductase DoxD from Pseudomonas fluorescens FW300-N2E2

 Score = 47.8 bits (112), Expect = 1e-10
 Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 2/101 (1%)

Query: 19  GLAPLALRLYLAPVLMQAGYNKLTHFDDTVAWFANPDW--GLGLPMPTLMAALAAGTEFF 76
           G     LR+ +  +    G  KL              W   +GL    +MA LA GTEFF
Sbjct: 14  GYGLTVLRIAVGVIFAAHGSQKLFGLFGGYGLAGTAQWMESIGLTPGYVMATLAGGTEFF 73

Query: 77  GAILLLLGLATRLISIPLMITMLVAAFTVHWPNGWLAIADG 117
             + L++GL  R  ++ L    LVA F VH  NG     +G
Sbjct: 74  AGLALIIGLLARPAALGLAFLSLVAIFAVHIGNGLFMANNG 114