Pairwise Alignments

Query, 521 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 552 a.a., protein of unknown function DUF935 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  164 bits (414), Expect = 1e-44
 Identities = 114/378 (30%), Positives = 198/378 (52%), Gaps = 12/378 (3%)

Query: 44  ITPQRLAGVLRSVIDGNDPEAYMTLAEEIEERDLHYAAQLRTRKFAVAAIT-PTVEAASD 102
           +TP RL  +L+S  DG+  + ++  A+ +E+R  H AA+L  RK A+  +    +   + 
Sbjct: 62  LTPARLKNILQSADDGDILQQHVLFAD-MEDRCEHLAAELAKRKRALLTLDWEILPGRAG 120

Query: 103 DAIDVLMAERAREIIND-DQIPELFFDLLDGLGKGLAVVQILWDTKSTPWKPQDYKWVDP 161
           DA    +A+  RE  +    + +LF D+ DG+G G A ++I W  +     PQ + +  P
Sbjct: 121 DAAARRVADAVREQFDALANVDDLFLDMADGVGHGFAALEIEWGREGKLHLPQAFHF-RP 179

Query: 162 RYLRQDQQTLEQILLISEDAPMGAELEPYKFIIHTPRSKSGSVWRNGLARLVAVMYMLKS 221
           +   Q        L + +    GAELE   +++HT RS+SG + R GL R++A  Y+++S
Sbjct: 180 QTWFQTPPHDRNALRLRDGTAQGAELETLGWVLHTHRSRSGWLARAGLFRVLAWSYLIRS 239

Query: 222 FTVRDWWAFAEVFGVPVRVGKYGANASESDISTLINAIGRIASDAGAVIPESMKLELIET 281
           + +    A+ EV G+P R+GKY A ++E D + L+ A+  +  DA  +IP+ M  E+I  
Sbjct: 240 YALASNAAYVEVHGMPFRLGKYPAASTEEDKAALLRALQALGRDAAGIIPQGM--EIIFQ 297

Query: 282 AKGNGGDTLFENMARWCDEQISKAVLGQTMTAD-NGSSQSQA--TVHNEVRIDIAKWDAR 338
              N     F  +   C+  +SKA+LG T+T+  +G S + A   VHNE+R D+   DA 
Sbjct: 298 TPPNSTHDHFGVLVDRCERGMSKAILGGTLTSQADGKSSTNALGAVHNEIRHDLLTSDAL 357

Query: 339 QLEASINEYLIKPYIILNWG--EQLRYPKVRIKVPEPEDLQLLVNSLTPLIDRGLKVSAS 396
           Q+  ++   ++ P  +LN G  +    P  R    +  D+    ++L P +   +++ A+
Sbjct: 358 QIAGTLTRQVLAPLAVLNAGVADARLLPWFRFDTRQAADIATYADAL-PKLSGVMRIPAA 416

Query: 397 EMADKLGLGTVDADEDIL 414
              +KL +     DE++L
Sbjct: 417 WAHEKLKIPLPQGDEEVL 434