Pairwise Alignments

Query, 205 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 205 a.a., lysogenization protein HflD from Vibrio cholerae E7946 ATCC 55056

 Score =  185 bits (470), Expect = 4e-52
 Identities = 92/200 (46%), Positives = 138/200 (69%), Gaps = 1/200 (0%)

Query: 1   MNEQLHNRTMAFAGILQAIAQVQYLARHGESDTDELAASLHTILVTDPETPADVYQDKAG 60
           M   +++RT+AFAGI QA+A VQ +A++G  D+D    SL  I  T+P    +V+  ++ 
Sbjct: 1   MANAIYDRTIAFAGICQAVALVQQVAKNGYCDSDAFETSLKAITCTNPSNTLEVFGHESQ 60

Query: 61  LHKGYQLVLNQLGDSSQKDVEITRYLVGILALERKLARSNSGLSMLAERINQVNRQLHHF 120
           L  G + ++  + DS+    EITRYL+ ++ALERKL+     +S L +RI  + RQL HF
Sbjct: 61  LKLGLECLVKGI-DSTPSGSEITRYLISLMALERKLSGRRDAMSQLGDRIQMIERQLDHF 119

Query: 121 AITDEQVIANLASIYSDIISNLGPKIQISGNPLCLQRPIVQQKIRALLLAAMRSAVLWRQ 180
            + D+Q+I+NLASIY D+IS +GP+IQ++G P  LQ+   Q K+RALLL+ +R AVLWRQ
Sbjct: 120 DLFDDQMISNLASIYLDVISPIGPRIQVTGTPAVLQQTANQHKVRALLLSGIRCAVLWRQ 179

Query: 181 LGGKRRHLVFARKAILDTAK 200
           +GG+RRHL+F RK +++ A+
Sbjct: 180 VGGRRRHLIFGRKKMIEQAQ 199