Pairwise Alignments

Query, 372 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 375 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase from Pseudomonas stutzeri RCH2

 Score =  497 bits (1280), Expect = e-145
 Identities = 240/357 (67%), Positives = 289/357 (80%), Gaps = 3/357 (0%)

Query: 12  KVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCAAAEDLKDAQAVCDKLG 71
           +VIVGMSGGVDSSVSA LL++QGYQVEGLFMKNWEEDD  EYC A EDL DAQAVCD++G
Sbjct: 13  RVIVGMSGGVDSSVSALLLLEQGYQVEGLFMKNWEEDDGTEYCTAKEDLADAQAVCDRIG 72

Query: 72  IKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADDILDADYIAM 131
           IKLHT NFAAEYWDNVFE+FLAEYKAGRTPNPDI+CN+EIKFKAFL++A  +L AD IA 
Sbjct: 73  IKLHTANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNREIKFKAFLDYAL-MLGADLIAT 131

Query: 132 GHYVRRRDNEDGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELEKHEVREIAKQM 191
           GHYVRRRD  DG +++L+G+D NKDQSYFL+ +  EQ+ ++LFPVGELEK  VR IA++ 
Sbjct: 132 GHYVRRRDR-DGRSELLKGLDPNKDQSYFLHAVGGEQLGKTLFPVGELEKPAVRAIAEKY 190

Query: 192 GLITHDKKDSTGICFIGERKFTEFLGNYLPAQPGNIETADGEVIGTHQGLMYHTLGQRKG 251
            L T  KKDSTGICFIGER+F++FL  YLPAQPGNIET DGEVIG H GLMYHT+GQR+G
Sbjct: 191 DLATAKKKDSTGICFIGERRFSDFLKQYLPAQPGNIETVDGEVIGRHHGLMYHTIGQRQG 250

Query: 252 LGIGGMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQLHWVDRKGPINGSQ 311
           LGIGG+K+++D+PWYV+ KDL+RN LVVGQG  HP L S  +L ++++WV+        +
Sbjct: 251 LGIGGLKDASDEPWYVLSKDLQRNALVVGQGNDHPWLFSRALLASEIYWVNPIDLSTPLK 310

Query: 312 IVVKTRYRQQDIPCTLTYLDDNTLKVVFDEPVAAVTPGQSAVFYDGEVCLGGGIIDQ 368
           +  K RYRQ D  CTL    +   + VF+ P  AVTPGQS VFYDGE+CLGGG+I+Q
Sbjct: 311 LTAKVRYRQSDQACTLEKTAEG-YRAVFEAPQRAVTPGQSVVFYDGEICLGGGVIEQ 366