Pairwise Alignments

Query, 372 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 372 a.a., tRNA 2-thiouridine(34) synthase MnmA from Vibrio cholerae E7946 ATCC 55056

 Score =  578 bits (1491), Expect = e-170
 Identities = 284/372 (76%), Positives = 316/372 (84%), Gaps = 2/372 (0%)

Query: 1   MTSIEPT-HTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCAAAED 59
           M S+E + ++ KKVIVGMSGGVDSSVSAYLL QQGYQVEGLFMKNWEEDDN+EYC AAED
Sbjct: 1   MMSVEHSANSQKKVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYCTAAED 60

Query: 60  LKDAQAVCDKLGIKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEF 119
           L DAQAVCDKLGI LHT+NFAAEYWDNVFEYFLAEYKAGRTPNPDI+CNKEIKFKAFLEF
Sbjct: 61  LADAQAVCDKLGIPLHTINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEF 120

Query: 120 ADDILDADYIAMGHYVRRRDNEDGTT-QMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGE 178
           AD++LDADYIAMGHYVRR   ++G   QMLRG+D NKDQSYFLYTLSHEQVAR+LFPVGE
Sbjct: 121 ADEVLDADYIAMGHYVRRTFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARTLFPVGE 180

Query: 179 LEKHEVREIAKQMGLITHDKKDSTGICFIGERKFTEFLGNYLPAQPGNIETADGEVIGTH 238
           LEK EVR IA++ GLIT  KKDSTGICFIGERKFT+FL  YLPAQPG IET +G+VIG H
Sbjct: 181 LEKPEVRRIAEEQGLITAKKKDSTGICFIGERKFTDFLSRYLPAQPGKIETPEGKVIGEH 240

Query: 239 QGLMYHTLGQRKGLGIGGMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQL 298
           QGLMYHTLGQRKGL IGGMK S++ PWYV DKDLKRNVL+  QG  HP L S+G++  QL
Sbjct: 241 QGLMYHTLGQRKGLHIGGMKESSEQPWYVADKDLKRNVLIAVQGADHPLLKSHGLVAAQL 300

Query: 299 HWVDRKGPINGSQIVVKTRYRQQDIPCTLTYLDDNTLKVVFDEPVAAVTPGQSAVFYDGE 358
           HWVDR       +  VKTRYRQ DI CT+  L D+ +KV+FDEP  AVTPGQSAVFY GE
Sbjct: 301 HWVDRTPITEPVRCSVKTRYRQSDIACTIIPLSDDRIKVMFDEPQVAVTPGQSAVFYQGE 360

Query: 359 VCLGGGIIDQLI 370
           +CLGGGII++ I
Sbjct: 361 ICLGGGIIEERI 372