Pairwise Alignments

Query, 372 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 377 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI) from Rhodospirillum rubrum S1H

 Score =  231 bits (588), Expect = 3e-65
 Identities = 146/380 (38%), Positives = 215/380 (56%), Gaps = 25/380 (6%)

Query: 2   TSIEPTHTGKKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDD----NDEYCAAA 57
           T + P   G +V+V MSGGVDSSV+A LL +QG+ V GL M+ ++           C A 
Sbjct: 4   TPLSPPPVGGRVVVAMSGGVDSSVTAALLKEQGHDVVGLTMRLYDHGKPLGPGARTCCAG 63

Query: 58  EDLKDAQAVCDKLGIKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFL 117
           +D+ DA+ V D+LGI  + +++ + + ++V E F A Y  G TP P ++CN+ +KF+  L
Sbjct: 64  QDIHDARRVADRLGIAHYVLDYESRFREDVIEPFAASYGRGETPIPCVLCNQTVKFRDLL 123

Query: 118 EFADDILDADYIAMGHYVRRRDNEDGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVG 177
             A D L    +A GHYVRR D  +G  ++ R VD  +DQSYFL+  +  Q+ R LFP+G
Sbjct: 124 AAALD-LGGTALATGHYVRRLDGPEG-PRLYRAVDPGRDQSYFLFATTKGQLGRLLFPLG 181

Query: 178 EL-EKHEVREIAKQMGLITHDKKDSTGICFIGERKFTEFLGNYLP--AQPGNIETADGEV 234
            +  K E R IA+++GL   DK DS  ICF+ +  + + +    P   + G I   DG V
Sbjct: 182 AMASKDETRAIARRLGLAVGDKPDSQDICFVPDGDYAKVVERLRPGVVEAGEIVDLDGTV 241

Query: 235 IGTHQGLMYHTLGQRKGLGIGGMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGML 294
           +G H GL++ T+GQR+G+GIGG    + +P YV+  D   + LVVG    H  L    + 
Sbjct: 242 LGHHPGLIHFTVGQRRGVGIGG----SAEPLYVIALDTATHRLVVGP---HAALARREIA 294

Query: 295 VNQLHWV-DRKGPIN-GSQIVVKTRYRQQDIPCTL-TYLDDNTLKVVFDEPVAAVTPGQS 351
           V+ L+W+ + +GP + G++  +K R+     P  +         +VV DEP   V PGQ+
Sbjct: 295 VSGLNWLGEGEGPASAGTRARIKIRHASPPFPGQIFPGAAAGEARVVLDEPAHGVAPGQA 354

Query: 352 AVFY-----DGEVCLGGGII 366
           AVFY     D  V LGGG I
Sbjct: 355 AVFYGLDDNDARV-LGGGWI 373