Pairwise Alignments

Query, 372 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 363 a.a., tRNA 2-thiouridine(34) synthase MnmA from Pedobacter sp. GW460-11-11-14-LB5

 Score =  229 bits (584), Expect = 9e-65
 Identities = 131/366 (35%), Positives = 209/366 (57%), Gaps = 20/366 (5%)

Query: 12  KVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEE-----DDNDEYCAAAEDLKDAQAV 66
           +++V MSGGVDSSV+A +L +QGY+V GL MK W+         +  C + + + DA+ +
Sbjct: 6   RILVAMSGGVDSSVAAVMLHEQGYEVIGLTMKTWDYATSGGSSKETGCCSLDSINDARTL 65

Query: 67  CDKLGIKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADDILDA 126
               G   + ++   E+ D V + F+ EY AGRTPNP ++CN  IK++A L+ A+  LD 
Sbjct: 66  AVNYGFPHYILDIRDEFGDYVIDNFVDEYLAGRTPNPCVLCNTHIKWEALLKRANK-LDC 124

Query: 127 DYIAMGHYVRRRDNEDGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELEKHEVRE 186
           ++IA GHY   R  + G   + +G D NKDQSY L+ +S E ++R+ FP+G   K E+R+
Sbjct: 125 EFIATGHYANIRQQDSGRYVISKGKDENKDQSYVLWGVSQENLSRTKFPLGSFAKSEIRQ 184

Query: 187 IAKQMGLITHDKK-DSTGICFIGERKFTEFLGNYLP-----AQPGNIETADGEVIGTHQG 240
           +A  MG     KK +S  ICF+ +  +  FL + +         GN   ++G V+G H+G
Sbjct: 185 MALDMGQEELAKKSESYEICFVPDNDYRAFLKHKVEDLEDRVAGGNFILSNGMVVGQHKG 244

Query: 241 LMYHTLGQRKGLGIGGMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQLHW 300
             ++T+GQRKGLG+     +  +P +V     + N +V+G+     R  +    +N + +
Sbjct: 245 YPFYTIGQRKGLGV-----AFGEPMFVTQILPESNTVVLGKAEELERREAMVRNINLIKY 299

Query: 301 VDRKGPINGSQIVVKTRYRQQDIPCTLTYLDDNTLKVVFDEPVAAVTPGQSAVFYDGEVC 360
              + P+N   ++ K RY+   +  T+    D  ++VVFD  V+A+ PGQSAVFY+G   
Sbjct: 300 ASIEEPMN--DVITKIRYKDAGMLSTIVQEKDK-MRVVFDHNVSAIAPGQSAVFYEGNDL 356

Query: 361 LGGGII 366
           LGGG +
Sbjct: 357 LGGGFL 362