Pairwise Alignments

Query, 372 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 376 a.a., tRNA 2-thiouridine(34) synthase MnmA from Dyella japonica UNC79MFTsu3.2

 Score =  407 bits (1046), Expect = e-118
 Identities = 205/355 (57%), Positives = 255/355 (71%), Gaps = 3/355 (0%)

Query: 12  KVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCAAAEDLKDAQAVCDKLG 71
           KV++G+SGGVDSSV+A LL Q G+QVEGLFM+NWEED+ +  C+A  D KDA AVC +LG
Sbjct: 2   KVMLGISGGVDSSVAALLLQQAGHQVEGLFMQNWEEDERNGPCSADADRKDAVAVCGRLG 61

Query: 72  IKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADDILDADYIAM 131
           I  H  NFAAEYWD VFE+FLAEY+AGRTPNPD++CN+EIKFK FL+ A   L A+ IA 
Sbjct: 62  IPFHARNFAAEYWDGVFEHFLAEYRAGRTPNPDVLCNREIKFKTFLDEAR-ALGAEKIAT 120

Query: 132 GHYVRRRDNEDGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELEKHEVREIAKQM 191
           GHY R  D  DG  ++LR VD +KDQ+YFL+ L   Q+A +LFPVGE+EK +VR +A + 
Sbjct: 121 GHYARV-DQRDGQYRLLRAVDASKDQTYFLHALGQRQLAATLFPVGEIEKSQVRRMALEA 179

Query: 192 GLITHDKKDSTGICFIGERKFTEFLGNYLPAQPGNIETADGEVIGTHQGLMYHTLGQRKG 251
            L TH KKDSTGICFIGER F EFL  Y+PA+PG + T +GE IG HQG+MY+TLGQR G
Sbjct: 180 ALPTHAKKDSTGICFIGERDFREFLSQYIPARPGEMRTPEGERIGEHQGVMYYTLGQRNG 239

Query: 252 LGIGGMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQLHWVDRKGPINGSQ 311
           LGIGG + ++ + WYVV KD+  NVL V QGG +  L S+ +      WV    P    +
Sbjct: 240 LGIGGRQGASGEAWYVVGKDVHANVLYVAQGGENHWLHSHRLHAEAPTWVAGAAPAGEFR 299

Query: 312 IVVKTRYRQQDIPCTLTYLDDNTLKVVFDEPVAAVTPGQSAVFYDGEVCLGGGII 366
              KTRYRQ D  C++  +D + ++VVFDE   AVTPGQS VFYDG  CLGG +I
Sbjct: 300 CTAKTRYRQHDQACSVR-VDADGVEVVFDEAQRAVTPGQSVVFYDGAACLGGAVI 353