Pairwise Alignments

Query, 372 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 370 a.a., tRNA 2-thiouridine(34) synthase MnmA from Ralstonia sp. UNC404CL21Col

 Score =  409 bits (1050), Expect = e-119
 Identities = 202/356 (56%), Positives = 253/356 (71%), Gaps = 2/356 (0%)

Query: 11  KKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCAAAEDLKDAQAVCDKL 70
           K+++VGMSGGVDSSV+A+LL QQGY V GLFMKNWE+DD+ EYC+  +D  D  +V D +
Sbjct: 4   KRIVVGMSGGVDSSVTAWLLKQQGYDVVGLFMKNWEDDDDSEYCSTRQDWIDVVSVADLI 63

Query: 71  GIKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADDILDADYIA 130
           G+ +  VNFAAEY D VF  FL EY AGRTPNPD++CN EIKFKAFL+ A   L AD IA
Sbjct: 64  GVDVEAVNFAAEYKDRVFADFLREYSAGRTPNPDVLCNAEIKFKAFLDHAM-ALGADTIA 122

Query: 131 MGHYVRRRDNEDGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELEKHEVREIAKQ 190
            GHY R R+  DG  ++L+  D+ KDQSYFL+ L+  Q++R+LFP+GE+ K +VREIA +
Sbjct: 123 TGHYARVRE-VDGRFELLKAFDHTKDQSYFLHRLNQAQLSRTLFPLGEMPKTKVREIAAE 181

Query: 191 MGLITHDKKDSTGICFIGERKFTEFLGNYLPAQPGNIETADGEVIGTHQGLMYHTLGQRK 250
           +GL    KKDSTGICFIGER F +FL  YLP +PG I+T DG+ IG H GL ++T GQRK
Sbjct: 182 IGLPNAKKKDSTGICFIGERPFRDFLNRYLPTKPGPIKTPDGKTIGEHIGLAFYTRGQRK 241

Query: 251 GLGIGGMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQLHWVDRKGPINGS 310
           G+GIGG ++ N D WYV  KD+  N L V QG  HP L+++ +  + L WV    P  G+
Sbjct: 242 GIGIGGSRDGNGDAWYVARKDMAANTLYVVQGHDHPWLLAHTVHADDLSWVAGHAPAEGT 301

Query: 311 QIVVKTRYRQQDIPCTLTYLDDNTLKVVFDEPVAAVTPGQSAVFYDGEVCLGGGII 366
            +  KTRYRQ D PCT+    D  L + F E   AVTPGQSAV YDGE+CLGGGII
Sbjct: 302 HLGAKTRYRQADAPCTVARAADGALTLAFPEAQWAVTPGQSAVLYDGEICLGGGII 357