Pairwise Alignments

Query, 372 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 381 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase from Paraburkholderia bryophila 376MFSha3.1

 Score =  394 bits (1012), Expect = e-114
 Identities = 194/359 (54%), Positives = 254/359 (70%), Gaps = 4/359 (1%)

Query: 11  KKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCAAAEDLKDAQAVCDKL 70
           +KV+VGMSGGVDSSV+A+LL +QGY V GLFMKNWE+DD+ EYC+  +D  D  +V D +
Sbjct: 4   QKVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDSEYCSTRQDWIDVVSVADLI 63

Query: 71  GIKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADDILDADYIA 130
           GI +  VNFA+EY D VF  FL EY AGRTPNPD++CN EIKFKAFL+ A   L A+ IA
Sbjct: 64  GIDVEAVNFASEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMS-LGAETIA 122

Query: 131 MGHYVRRRDNEDGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELEKHEVREIAKQ 190
            GHY R R+N +G  ++L+  D+ KDQSYFL+ L+  Q++++LFP+GE+ K +VREIA+Q
Sbjct: 123 TGHYARVREN-NGRFELLKAFDHTKDQSYFLHRLNQAQLSKTLFPLGEIPKTKVREIAEQ 181

Query: 191 MGLITHDKKDSTGICFIGERKFTEFLGNYLPAQPGNIETADGEVIGTHQGLMYHTLGQRK 250
           + L    KKDSTGICFIGER F +FL  YLP +PG ++T DG+ +G H GL ++T GQRK
Sbjct: 182 IALPNAKKKDSTGICFIGERPFRDFLNRYLPTRPGPMKTTDGKTVGEHIGLAFYTFGQRK 241

Query: 251 GLGIGGMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQLHWVDRKGPINGS 310
           G+G+GG K  + +PW+V  KD+  N L V QG  HP L+S+ +      WV  + P  G 
Sbjct: 242 GIGLGGSKEGSGEPWFVAGKDIASNTLYVAQGHDHPWLLSHTLSAGNTSWVAGEPPAEGF 301

Query: 311 QIVVKTRYRQQDIPCTLTYLD--DNTLKVVFDEPVAAVTPGQSAVFYDGEVCLGGGIID 367
               KTRYRQ D  CT T  +  ++  ++ FD+   AVTPGQSAV YDG+VCLGGGII+
Sbjct: 302 ACGAKTRYRQADARCTFTTANYGESLFELNFDDAQWAVTPGQSAVLYDGDVCLGGGIIE 360