Pairwise Alignments

Query, 372 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 383 a.a., tRNA-specific 2-thiouridylase MnmA from Burkholderia phytofirmans PsJN

 Score =  398 bits (1022), Expect = e-115
 Identities = 197/365 (53%), Positives = 256/365 (70%), Gaps = 4/365 (1%)

Query: 11  KKVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDNDEYCAAAEDLKDAQAVCDKL 70
           +KV+VGMSGGVDSSV+A+LL +QGY V GLFMKNWE+DD+ EYC+  +D  D  +V D +
Sbjct: 4   QKVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDSEYCSTRQDWIDVVSVADLI 63

Query: 71  GIKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADDILDADYIA 130
           GI +  VNFAAEY D VF  FL EY AGRTPNPD++CN EIKFKAFL+ A   L A+ IA
Sbjct: 64  GIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMS-LGAETIA 122

Query: 131 MGHYVRRRDNE-DGTTQMLRGVDNNKDQSYFLYTLSHEQVARSLFPVGELEKHEVREIAK 189
            GHY R R NE +G  ++L+  D+ KDQSYFL+ L+  Q++++LFP+GE+ K +VREIA+
Sbjct: 123 TGHYARVRQNERNGRFELLKAFDHTKDQSYFLHRLNQAQLSKTLFPLGEIPKTKVREIAE 182

Query: 190 QMGLITHDKKDSTGICFIGERKFTEFLGNYLPAQPGNIETADGEVIGTHQGLMYHTLGQR 249
           Q+ L    KKDSTGICFIGER F +FL  YLP +PG ++T DG+V+G H GL ++T GQR
Sbjct: 183 QIALPNAKKKDSTGICFIGERPFRDFLNRYLPTKPGPMKTTDGKVVGEHIGLAFYTFGQR 242

Query: 250 KGLGIGGMKNSNDDPWYVVDKDLKRNVLVVGQGGHHPRLMSNGMLVNQLHWVDRKGPING 309
           KG+G+GG K+ + +PW+V  KD+  N L V QG  H  L+S+ +      WV  + P +G
Sbjct: 243 KGIGLGGSKDGSGEPWFVAGKDIASNTLYVAQGHDHAWLLSHTLSAGNTSWVAGEPPADG 302

Query: 310 SQIVVKTRYRQQDIPCTLTYL--DDNTLKVVFDEPVAAVTPGQSAVFYDGEVCLGGGIID 367
                KTRYRQ D PCT +     +   ++ FD    AVTPGQSAV YDG+VCLGGGII+
Sbjct: 303 FACGAKTRYRQADAPCTFSSAGSGEGLFELNFDAAQWAVTPGQSAVLYDGDVCLGGGIIE 362

Query: 368 QLIRG 372
             + G
Sbjct: 363 HAVTG 367