Pairwise Alignments

Query, 269 a.a., 4-amino-4-deoxychorismate lyase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 319 a.a., branched-chain-amino-acid transaminase from Vibrio cholerae E7946 ATCC 55056

 Score = 50.4 bits (119), Expect = 5e-11
 Identities = 55/271 (20%), Positives = 105/271 (38%), Gaps = 34/271 (12%)

Query: 2   IWVNGVL----QASIAPTDRGLAYGDGLFATMR--SSKRGILFFQ--QHQARLETGAA-- 51
           IW NG +     A++      + YG  +F  +R  ++ +G + F+  +H  RL   A   
Sbjct: 16  IWFNGEMIPWANATVHVLTHAMHYGTSVFEGVRCYNTPKGPIIFRHREHAQRLLDSAKIY 75

Query: 52  RLGFDWQMSPALAEQLDTLAAQYPQHC-IKLMVTRGVGGRGYAPPEQVNVTEVVSVHP-- 108
           R    + +   +    +TL      +  I+ +   G  G G  PP    +  +++  P  
Sbjct: 76  RFPIPYSIETIMEATRETLRVNKLDNAYIRPLAYVGNVGLGVCPPVGTEMDLMIAAFPWG 135

Query: 109 -----------IPAHYAAWQQQGIRLKTSAVQLGHQPLLAGIKHLNRLEQVLIKSLPLPQ 157
                      + A  ++W +       +A + G           N L  +L+       
Sbjct: 136 AYLGEEALENGVDAMVSSWHRAAPNTIPTAAKAGG----------NYLSSLLVGGEARRH 185

Query: 158 GYDDWLVLDCMGKVIESSMANIFFIKDNQVVTPSLEHCGVAGVMREQVMLALLALQMDID 217
           GY + + L   G + E +  NIF +K+  ++TP      + G+ R+ +M     +  ++ 
Sbjct: 186 GYAEGIALSVDGYLSEGAGENIFVVKNGVILTPPTTSSILPGITRDSIMTLARDMGYEVR 245

Query: 218 CLPFGAERLVEFDSAFITNSVLGVVDVLAID 248
                 E L   D  F+T +   VV V ++D
Sbjct: 246 EANISREALYLADEIFMTGTAAEVVPVRSVD 276