Pairwise Alignments

Query, 318 a.a., DNA polymerase III, delta prime subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 697 a.a., DNA polymerase III subunits gamma and tau (EC 2.7.7.7) from Pseudomonas fluorescens FW300-N2E2

 Score = 75.9 bits (185), Expect = 3e-18
 Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 7/196 (3%)

Query: 20  QAFLTQLQTQKVPHAQLVGIDSAYGGELLSVFMARAAMCSQPTHTGGCGFCKSCQLFDAG 79
           +A +  L +Q++ HA L       G   ++  +A+   C     +  CG C  C+  D G
Sbjct: 26  KALINALDSQRLHHAYLFTGTRGVGKTTIARIIAKCLNCETGITSTPCGECSVCREIDEG 85

Query: 80  NHPDFYQIEADGHQIKVDQIRELCSRLSATAQQSGRRVAIIHHSERLNSASANALLKTLE 139
              D  +I+A   + KV+  REL   +     +   +V +I     L+S S NALLKTLE
Sbjct: 86  RFVDLIEIDA-ASRTKVEDTRELLDNVQYAPSRGRFKVYLIDEVHMLSSHSFNALLKTLE 144

Query: 140 EPGKDTLLLLHSDTPARLMATISSRCQRLPFVAPSKTLIKNWL-----IQQCQIQEDVTW 194
           EP      +L +  P +L ATI SRC +      +   +   L     ++    ++D  W
Sbjct: 145 EPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTPERVVEHLTHVLGVENVPFEDDALW 204

Query: 195 CLS-VVGGPLKLAESL 209
            L     G ++ A SL
Sbjct: 205 LLGRAADGSMRDAMSL 220