Pairwise Alignments

Query, 318 a.a., DNA polymerase III, delta prime subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 324 a.a., DNA polymerase III subunit delta' from Vibrio cholerae E7946 ATCC 55056

 Score =  123 bits (309), Expect = 5e-33
 Identities = 69/172 (40%), Positives = 97/172 (56%), Gaps = 3/172 (1%)

Query: 13  PWLDVPRQAFLTQLQTQKVPHAQLVGIDSAYGGELLSVFMARAAMCSQPTHTGGCGFCKS 72
           PWL    Q +   L   K+  A L+      G E L   MAR  MC+  + +  CGFC S
Sbjct: 9   PWLVPVWQPWQAGLAAGKISSATLIQASEGVGVESLVELMARTLMCTS-SQSEPCGFCHS 67

Query: 73  CQLFDAGNHPDFYQIEAD--GHQIKVDQIRELCSRLSATAQQSGRRVAIIHHSERLNSAS 130
           C L  +GNHPDF+ ++ +  G  I V+QIR++      ++Q SG R+ +I  ++ +N +S
Sbjct: 68  CGLMQSGNHPDFHVVKPEKIGKSITVEQIRQMNRIAQESSQLSGYRLIVIEPADAMNESS 127

Query: 131 ANALLKTLEEPGKDTLLLLHSDTPARLMATISSRCQRLPFVAPSKTLIKNWL 182
           ANALLKTLEEP  + L +L +     L+ TI SRCQRL   AP+  L+  WL
Sbjct: 128 ANALLKTLEEPAPNCLFILVTSRIKHLLPTIVSRCQRLVLPAPTTALVVEWL 179