Pairwise Alignments

Query, 318 a.a., DNA polymerase III, delta prime subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 909 a.a., DNA-directed DNA polymerase (RefSeq) from Shewanella amazonensis SB2B

 Score = 71.2 bits (173), Expect = 9e-17
 Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 1/145 (0%)

Query: 21  AFLTQLQTQKVPHAQLVGIDSAYGGELLSVFMARAAMCSQPTHTGGCGFCKSCQLFDAGN 80
           A    L  Q++ HA L       G   L+   A+   C Q      CG C +C+    G 
Sbjct: 27  ALTNALGQQRLHHAYLFTGTRGVGKTSLARLFAKGLNCEQGITATPCGQCSACREIAEGR 86

Query: 81  HPDFYQIEADGHQIKVDQIRELCSRLSATAQQSGRRVAIIHHSERLNSASANALLKTLEE 140
             D  +++A   + KVD  RE+   +     +   +V +I     L+ +S NALLKTLEE
Sbjct: 87  FVDLIEVDA-ASRTKVDDTREILDNVQYRPSRGRFKVYLIDEVHMLSKSSFNALLKTLEE 145

Query: 141 PGKDTLLLLHSDTPARLMATISSRC 165
           P +    LL +  P +L  T+ SRC
Sbjct: 146 PPEHVKFLLATTDPQKLPVTVLSRC 170