Pairwise Alignments

Query, 318 a.a., DNA polymerase III, delta prime subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 351 a.a., DNA polymerase III subunit delta' from Rhodopseudomonas palustris CGA009

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 56/167 (33%), Positives = 79/167 (47%), Gaps = 20/167 (11%)

Query: 20  QAFLTQLQTQKVPHAQLVGIDSAYGGELLSVFMARAAMCSQPTHTGGCGFCKSCQLFDAG 79
           QA L   +  ++ HA L+G     G   L+  MAR  +  +   +       S  +    
Sbjct: 34  QALLDAYRGGRIAHAWLIGGAQGIGKATLAYRMARFVLTHREPQSDAVQSAASLAIDP-- 91

Query: 80  NHPDFYQIEADGHQ------------------IKVDQIRELCSRLSATAQQSGRRVAIIH 121
           +HP    I A+ H                   I VD+ RE  S   ATA   G RV I+ 
Sbjct: 92  DHPVARHIAAEAHGGLLTLERSVNDKGVLRNVITVDESRETISFFGATAAIDGWRVCIVD 151

Query: 122 HSERLNSASANALLKTLEEPGKDTLLLLHSDTPARLMATISSRCQRL 168
             + LN+ SANALLK +EEP + +L LL S+ PAR++ TI SRC++L
Sbjct: 152 TVDDLNANSANALLKVIEEPPQRSLFLLLSNAPARVLPTIQSRCRKL 198