Pairwise Alignments

Query, 318 a.a., DNA polymerase III, delta prime subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 374 a.a., putative DNA polymerase III, delta subunit (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 42/192 (21%)

Query: 19  RQAFLTQLQTQKVPHAQLVGIDSAYGGELLSVFMARAAMCSQPTHTGGCGFCKSCQLFDA 78
           +Q  + ++   ++PHAQL+      G   L++  AR   C+    T  CG C SC  F+ 
Sbjct: 13  KQRLIQEVSEGRIPHAQLICGPEGVGKMPLAIAYARYISCTNRGETDACGVCPSCVKFNK 72

Query: 79  GNHPDFY----------------------------------------QIEADGHQ--IKV 96
             HPD +                                        +++A+  Q  I  
Sbjct: 73  LVHPDVHFVFPIVKSSKGKREVCDDYIADWRPFVLKNPYFNLNHWLREMDAENAQAIIYA 132

Query: 97  DQIRELCSRLSATAQQSGRRVAIIHHSERLNSASANALLKTLEEPGKDTLLLLHSDTPAR 156
            +  E+  +LS  + + G ++ I+   E++    AN LLK LEEP + T+ LL S+ P  
Sbjct: 133 KESDEILKKLSLKSSEGGFKITILWLPEKMYPVCANKLLKLLEEPPEKTIFLLVSEAPEM 192

Query: 157 LMATISSRCQRL 168
           ++ TI SR QR+
Sbjct: 193 ILPTILSRTQRM 204