Pairwise Alignments

Query, 318 a.a., DNA polymerase III, delta prime subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 344 a.a., DNA polymerase III subunit delta' from Burkholderia phytofirmans PsJN

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 33/222 (14%)

Query: 32  PHAQLVGIDSAYGGELLSVFMARAAMCSQPTHTGG-CGFCKSCQLFDAGNHPDFYQI--- 87
           PHA L+   +  G    +  +A+  +C      G  CG C +C  F  GNHPD+  +   
Sbjct: 21  PHALLLHGQAGIGKLRFAQHLAQGLLCEAQQPNGEPCGACVACNWFAQGNHPDYRIVVPE 80

Query: 88  ---------------------------EADGHQIKVDQIRELCSRLSATAQQSGRRVAII 120
                                       A   +IK++QIR L   +   + + G RV ++
Sbjct: 81  ALAAEAGLNSGADEKADKADADEGKKTRAPSKEIKIEQIRGLLDFVGVGSHRGGARVVVL 140

Query: 121 HHSERLNSASANALLKTLEEPGKDTLLLLHSDTPARLMATISSRCQRLPFVAPSKTLIKN 180
           + +E LN A+ANALLKTLEEP    + L+ S    RL+ TI SRC++ P   P+  +   
Sbjct: 141 YPAEGLNIAAANALLKTLEEPPAGVVFLMVSARIDRLLPTIISRCRQWPMTMPAPEVATK 200

Query: 181 WLIQQCQIQEDVTWCLSVVGGPLKLAESLQSNSTQPSRYQTL 222
           WL  Q   +      L+  GG    A +L S+  +  R  TL
Sbjct: 201 WLAAQGVAEAPA--LLAEAGGAPLTALALASDENRALRDWTL 240