Pairwise Alignments

Query, 318 a.a., DNA polymerase III, delta prime subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 318 a.a., DNA polymerase III, delta prime subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  597 bits (1539), Expect = e-175
 Identities = 297/318 (93%), Positives = 306/318 (96%)

Query: 1   MVEHRGFDVLSLPWLDVPRQAFLTQLQTQKVPHAQLVGIDSAYGGELLSVFMARAAMCSQ 60
           MV   GFDVL+LPWLD PRQAFLTQLQTQKVPHAQLVGIDSAYGGELLSVFMARAAMCSQ
Sbjct: 1   MVAQSGFDVLTLPWLDTPRQAFLTQLQTQKVPHAQLVGIDSAYGGELLSVFMARAAMCSQ 60

Query: 61  PTHTGGCGFCKSCQLFDAGNHPDFYQIEADGHQIKVDQIRELCSRLSATAQQSGRRVAII 120
           PT  GGCGFCKSCQLFDAGNHPDFYQIEADGHQIKVDQIRELC+RLSATAQQSGRRVAII
Sbjct: 61  PTPAGGCGFCKSCQLFDAGNHPDFYQIEADGHQIKVDQIRELCTRLSATAQQSGRRVAII 120

Query: 121 HHSERLNSASANALLKTLEEPGKDTLLLLHSDTPARLMATISSRCQRLPFVAPSKTLIKN 180
           HHSERLNSASANALLKTLEEPGKDTLLLLHSDTPARLMATISSRCQRLPFVAPSK LIKN
Sbjct: 121 HHSERLNSASANALLKTLEEPGKDTLLLLHSDTPARLMATISSRCQRLPFVAPSKMLIKN 180

Query: 181 WLIQQCQIQEDVTWCLSVVGGPLKLAESLQSNSTQPSRYQTLLGFRKDWAQSLSSGHLCA 240
           WLIQ CQIQEDVTWCLSVVGGPLKLAESLQ++  QPSRYQTLLGFRKDWAQSLSSG+LCA
Sbjct: 181 WLIQHCQIQEDVTWCLSVVGGPLKLAESLQTDGAQPSRYQTLLGFRKDWAQSLSSGYLCA 240

Query: 241 SLLIISEQQIIDALKVLYLLLRQILLKNGNQDAYVQAQIGNLAAKVMGMCHSLSAMPSVN 300
           SLL ISEQQIIDALKVLYLLLRQILLK G+QDA+VQAQIGNLAAK+MGMCHSLSAMPSVN
Sbjct: 241 SLLTISEQQIIDALKVLYLLLRQILLKYGDQDAFVQAQIGNLAAKIMGMCHSLSAMPSVN 300

Query: 301 YLGLCQSYVLEYRDITNK 318
           YLGLCQSYVLEYR+ITNK
Sbjct: 301 YLGLCQSYVLEYREITNK 318